RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 VWA5AO00534 786 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 GCNT3O95395 438 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 PDHA1P08559 390 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 NEFHP12036 1026 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 PCK1P35558 622 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 EIF3BP55884 814 aaKnown RBP12□□□□□ -0.49
RPRD1B-201ENST00000373433 NEK9Q8TD19 979 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 TSC22D3Q99576 134 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 MAGEF1Q9HAY2 307 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 FAM114A2Q9NRY5 505 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 IRAK4Q9NWZ3 460 aa12□□□□□ -0.49
RPRD1B-201ENST00000373433 CORO1CQ9ULV4 474 aaPredicted RBP12□□□□□ -0.49
RPRD1B-201ENST00000373433 RBAK-RBAKDNI3L0D1 243 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 PLA2G4BP0C869 781 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 CTCFP49711 727 aaPredicted RBP11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 STXBP2Q15833 593 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 IFI16Q16666 785 aaKnown RBP11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 SLC30A9Q6PML9 568 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 NUCKS1Q9H1E3 243 aaKnown RBP11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 MYH1P12882 1939 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 POTEFA5A3E0 1075 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 E9PMD0 336 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 CCDC188H7C350 402 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 FGGP02679 453 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 NBPF20Q3BBV1 942 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 Q3C1V9 767 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 POTEGQ6S5H5 508 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 POTEEQ6S8J3 1075 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 OTUD6AQ7L8S5 288 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 EIF1ADQ8N9N8 165 aaKnown RBP11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 TLCD1Q96CP7 247 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 TAAR1Q96RJ0 339 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 HOMER3Q9NSC5 361 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 FGFR1OP2Q9NVK5 253 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 ZFATQ9P243 1243 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 MYMKA6NI61 221 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 PPP1R11O60927 126 aaPredicted RBP11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 LUC7L3O95232 432 aaKnown RBP11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 NR3C2P08235 984 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 RARAP10276 462 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 MXRA7P84157 204 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 FAM26FQ5R3K3 315 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 PIGWQ7Z7B1 504 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 ACTRT1Q8TDG2 376 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 ATXN2LQ8WWM7 1075 aaKnown RBP11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 IFT74Q96LB3 600 aa11.99□□□□□ -0.49
RPRD1B-201ENST00000373433 MYH4Q9Y623 1939 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 USP2O75604 605 aaPredicted RBP11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 KRT13P13646 458 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 PECAM1P16284 738 aaPredicted RBP11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 MSH2P43246 934 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 SIAH1Q8IUQ4 282 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 PPP1R16BQ96T49 567 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 SNX24Q9Y343 169 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 COL4A3BPQ9Y5P4 624 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 TMEM110-MUSTN1A8MSY1 372 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 DSG3P32926 999 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 PMS2P54278 862 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 PPATQ06203 517 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 BLMHQ13867 455 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 PDIA5Q14554 519 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 NUGGCQ68CJ6 796 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 ANKRD42Q8N9B4 389 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 SLC17A8Q8NDX2 589 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 CENPTQ96BT3 561 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 NACC1Q96RE7 527 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 RGL1Q9NZL6 768 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 HIP1RO75146 1068 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 NOL4O94818 638 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 SUN1O94901 812 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 LINGO3P0C6S8 592 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 GNAT1P11488 350 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 CETPP11597 493 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 PDE6CP51160 858 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 PTK2Q05397 1052 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 SLC29A2Q14542 456 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 BTNL9Q6UXG8 535 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 CCDC25Q86WR0 208 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 CYP2W1Q8TAV3 490 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 EPS8L3Q8TE67 593 aaKnown RBP11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 TEPSINQ96N21 525 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 RAB17Q9H0T7 212 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 SLITRK6Q9H5Y7 841 aa11.98□□□□□ -0.49
RPRD1B-201ENST00000373433 TCP11X1B4DZS4 312 aa11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 CXCL11O14625 94 aa11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 CNGA1P29973 690 aa11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 ABL2P42684 1182 aa11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 COPS2P61201 443 aa11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 LRRC63Q05C16 580 aa11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 SLC35G1Q2M3R5 365 aa11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 DDX12PQ92771 950 aa11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 NAF1Q96HR8 494 aaKnown RBP11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 EDEM3Q9BZQ6 932 aa11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 RANBP17Q9H2T7 1088 aaKnown RBP11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 DBR1Q9UK59 544 aaKnown RBP11.97□□□□□ -0.49
RPRD1B-201ENST00000373433 USP15Q9Y4E8 981 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms