RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 MAP1BP46821 2468 aaKnown RBP17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 MIA3Q5JRA6 1907 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 CACNA1GO43497 2377 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 ESYT2A0FGR8 921 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 HNRNPA1P09651 372 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 TDGF1P13385 188 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 SCNN1GP51170 649 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 ADCY1Q08828 1119 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 FZD5Q13467 585 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 LIN9Q5TKA1 542 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 LRCH2Q5VUJ6 765 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 PRR23CQ6ZRP0 262 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 PRR23BQ6ZRT6 265 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 ITFG1Q8TB96 612 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 JPH2Q9BR39 696 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 ZMYND12Q9H0C1 365 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 C6orf50Q9HD87 102 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 POLIQ9UNA4 740 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 IPPQ9Y573 584 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 COL4A3BPQ9Y5P4 624 aa17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 MYH9P35579 1960 aaKnown RBP17.57■□□□□ 0.4
TRAPPC3-203ENST00000373163 DDX11L8A8MPP1 907 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 SLC27A2O14975 620 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 ZBTB43O43298 467 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 PPP2R5DQ14738 602 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 CSRP2Q16527 193 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 PFKFB3Q16875 520 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 PPM1LQ5SGD2 360 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 MIER3Q7Z3K6 550 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 SRGAP1Q7Z6B7 1085 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 DDX1Q92499 740 aaKnown RBP17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 SLC5A5Q92911 643 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 GJA10Q969M2 543 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 ZFP42Q96MM3 310 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 MINDY3Q9H8M7 445 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 MIOSQ9NXC5 875 aa17.56■□□□□ 0.4
TRAPPC3-203ENST00000373163 CCL16O15467 120 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 XYLBO75191 536 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 C8AP07357 584 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 SRGAP2CP0DJJ0 459 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 PMLP29590 882 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 PRSS55Q6UWB4 352 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 NPAS3Q8IXF0 933 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 CCDC12Q8WUD4 166 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 CCDC136Q96JN2 1154 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 SH2B1Q9NRF2 756 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 HEBP1Q9NRV9 189 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 ADAM28Q9UKQ2 775 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 BRPF3Q9ULD4 1205 aa17.55■□□□□ 0.4
TRAPPC3-203ENST00000373163 GOLGA8AA7E2F4 631 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 GOLGA8BA8MQT2 603 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 GDF9O60383 454 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 HOXA9P31269 272 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 SHC2P98077 582 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 RTP2Q5QGT7 225 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 PLA2G4FQ68DD2 849 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 ANO5Q75V66 913 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 EIF2AQ9BY44 585 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 CHRDQ9H2X0 955 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 NDRG2Q9UN36 371 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 HES2Q9Y543 173 aa17.54■□□□□ 0.4
TRAPPC3-203ENST00000373163 MYH15Q9Y2K3 1946 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 SHISA7A6NL88 538 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 ECI2O75521 394 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 PSMD10O75832 226 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 GNA11P29992 359 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 CDC27P30260 824 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 SIM2Q14190 667 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 IL31Q6EBC2 164 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 MAMSTRQ6ZN01 415 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 PRPF31Q8WWY3 499 aaKnown RBP17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 PSPC1Q8WXF1 523 aaKnown RBP17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 SLC7A3Q8WY07 619 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 RABGGTAQ92696 567 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 IER2Q9BTL4 223 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 APOL6Q9BWW8 343 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 KCNH3Q9ULD8 1083 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 USP24Q9UPU5 2620 aa17.53■□□□□ 0.4
TRAPPC3-203ENST00000373163 SF3B1O75533 1304 aaKnown RBP eCLIP17.52■□□□□ 0.46e-6■■■■■ 103.4
TRAPPC3-203ENST00000373163 EDIL3O43854 480 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 FOXD2O60548 495 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 TADA2AO75478 443 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 ERLIN2O94905 339 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 CCR3P51677 355 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 PABPC1LQ4VXU2 614 aaKnown RBP17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 N4BP2L1Q5TBK1 243 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 CREB3L3Q68CJ9 461 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 ZNF687Q8N1G0 1237 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 SLC7A14Q8TBB6 771 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 ING5Q8WYH8 240 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 CLSTN3Q9BQT9 956 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 PLA2G2FQ9BZM2 168 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 LSG1Q9H089 658 aaKnown RBP17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 GIT1Q9Y2X7 761 aa17.52■□□□□ 0.4
TRAPPC3-203ENST00000373163 POU2F2P09086 479 aa17.51■□□□□ 0.39
TRAPPC3-203ENST00000373163 USP11P51784 963 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms