RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 SNX9Q9Y5X1 595 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 PFASO15067 1338 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 SUN1O94901 812 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 SLC25A27O95847 323 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 PCK1P35558 622 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 HUNKP57058 714 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 RYBPQ8N488 228 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-203ENST00000368207 SLC35G2Q8TBE7 412 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 KLHL11Q9NVR0 708 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 PPP1R9AQ9ULJ8 1098 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 SHPRHQ149N8 1683 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 ATP8B3O60423 1300 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 PI4K2BG5E9Z4 385 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 WNT10BO00744 389 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 RASSF2P50749 326 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 SEPT6Q14141 434 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 MFSD14CQ5VZR4 134 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 PCGF5Q86SE9 256 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 CCDC197Q8NCU1 140 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 TACO1Q9BSH4 297 aaKnown RBP13.11□□□□□ -0.31
PTPRK-203ENST00000368207 ANKEF1Q9NU02 776 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 CHORDC1Q9UHD1 332 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-203ENST00000368207 F5H423 210 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-203ENST00000368207 EIF3DO15371 548 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTPRK-203ENST00000368207 RTN2O75298 545 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 GH1P01241 217 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 PGK2P07205 417 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 GGCXP38435 758 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 CASP4P49662 377 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 IRX4P78413 519 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 PDCLQ13371 301 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 SEZ6Q53EL9 994 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 TTI2Q6NXR4 508 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 CCDC137Q6PK04 289 aaKnown RBP13.11□□□□□ -0.31
PTPRK-203ENST00000368207 TRIM72Q6ZMU5 477 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 GPRC5AQ8NFJ5 357 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 ERGIC2Q96RQ1 377 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 ARHGAP42A6NI28 874 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 SLC26A4O43511 780 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 HLA-DRAP01903 254 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 TPD52P55327 224 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-203ENST00000368207 EIF3BP55884 814 aaKnown RBP13.1□□□□□ -0.31
PTPRK-203ENST00000368207 GMCL1P1Q8NEA9 526 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 IP6K2Q9UHH9 426 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 TYW5A2RUC4 315 aaKnown RBP13.1□□□□□ -0.31
PTPRK-203ENST00000368207 RGL2O15211 777 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 CREB3O43889 395 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 CLTAP09496 248 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 TGFB2P61812 414 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 PSMC6P62333 389 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 KLHDC7AQ5VTJ3 777 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 TEX2Q8IWB9 1127 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 EXOC4Q96A65 974 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 PCDHAC2Q9Y5I4 1007 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 KLRC1P26715 233 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 ELF1P32519 619 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-203ENST00000368207 AP3M2P53677 418 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 RHBDL3P58872 404 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 EFCAB12Q6NXP0 572 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 XRRA1Q6P2D8 792 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 RBBP8NLQ8NC74 664 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-203ENST00000368207 GPRASP2Q96D09 838 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 SEMA6BQ9H3T3 888 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 ADAM21Q9UKJ8 722 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 IGSF9BQ9UPX0 1349 aa13.1□□□□□ -0.31
PTPRK-203ENST00000368207 DDNO94850 711 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 THEM5Q8N1Q8 247 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 SKA2Q8WVK7 121 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 MKNK1Q9BUB5 465 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 PPP1R12CQ9BZL4 782 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 ATMINO43313 823 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 BNIP3LO60238 219 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 GIT2Q14161 759 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 MMS22LQ6ZRQ5 1243 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 CERS5Q8N5B7 392 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 KLHL8Q9P2G9 620 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 KIAA0391O15091 583 aaKnown RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 RGS7P49802 495 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 NAA25Q14CX7 972 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 RSRC1Q96IZ7 334 aaKnown RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 DHX35Q9H5Z1 703 aaKnown RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 A0A087X0B3 334 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 KRT7P08729 469 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 CHRNA3P32297 505 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 NCAPHQ15003 741 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 NAB2Q15742 525 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 FAM83AQ86UY5 434 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 SYTL5Q8TDW5 730 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 NUDT12Q9BQG2 462 aa13.09□□□□□ -0.31
PTPRK-203ENST00000368207 PARVAQ9NVD7 372 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms