RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CHUKO15111 745 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 PALMO75781 387 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 KIF4AO95239 1232 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 FOSL2P15408 326 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 KLRC1P26715 233 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 CDR1P51861 262 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 BEX3Q00994 111 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 GUCY2DQ02846 1103 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 TNFAIP2Q03169 654 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 ACTN3Q08043 901 aaPredicted RBP12.48□□□□□ -0.41
USF1-201ENST00000368019 COASYQ13057 564 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 PPIGQ13427 754 aaKnown RBP eCLIP12.48□□□□□ -0.413e-6■■■■□ 19.3
USF1-201ENST00000368019 ASIC2Q16515 512 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 FAM26FQ5R3K3 315 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 FMNL3Q8IVF7 1028 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 CCDC65Q8IXS2 484 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 SYCE1Q8N0S2 351 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 MORC4Q8TE76 937 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 LMBR1Q8WVP7 490 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 SEC14L1Q92503 715 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 CENPTQ96BT3 561 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 DNAJC19Q96DA6 116 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
USF1-201ENST00000368019 DRC1Q96MC2 740 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 GLT8D2Q9H1C3 349 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 PRR12Q9ULL5 1215 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 NENFQ9UMX5 172 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 CAPN7Q9Y6W3 813 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 TRANK1O15050 2925 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 REV3LO60673 3130 aa12.48□□□□□ -0.41
USF1-201ENST00000368019 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
USF1-201ENST00000368019 GOLGA6L7A0A1B0GV03 622 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 FRMD3A2A2Y4 597 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 GCOM1H8Y6P7 765 aaPredicted RBP12.47□□□□□ -0.41
USF1-201ENST00000368019 NCK2O43639 380 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 MYZAPP0CAP1 466 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 GHRP10912 638 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 CSF2RAP15509 400 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 MATR3P43243 847 aaKnown RBP eCLIP12.47□□□□□ -0.41
USF1-201ENST00000368019 EIF3BP55884 814 aaKnown RBP12.47□□□□□ -0.41
USF1-201ENST00000368019 IFFO1Q0D2I5 559 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 RPS6KA1Q15418 735 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 LACTB2Q53H82 288 aaPredicted RBP12.47□□□□□ -0.41
USF1-201ENST00000368019 TAPT1Q6NXT6 567 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 KCTD1Q719H9 257 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 SLFN11Q7Z7L1 901 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 SNX29Q8TEQ0 813 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 DDX12PQ92771 950 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 CCT8L2Q96SF2 557 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 LSM14BQ9BX40 385 aaKnown RBP12.47□□□□□ -0.41
USF1-201ENST00000368019 ZNF576Q9H609 170 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 CNOT10Q9H9A5 744 aaKnown RBP12.47□□□□□ -0.41
USF1-201ENST00000368019 FAM114A2Q9NRY5 505 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 CYP39A1Q9NYL5 469 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 SLC12A6Q9UHW9 1150 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 PLAAQ9Y263 795 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.47□□□□□ -0.41
USF1-201ENST00000368019 NFS1Q9Y697 457 aa12.47□□□□□ -0.41
USF1-201ENST00000368019 GRXCR1A8MXD5 290 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 H0YHG0 523 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 PGRMC1O00264 195 aaKnown RBP12.46□□□□□ -0.41
USF1-201ENST00000368019 TLR3O15455 904 aaKnown RBP12.46□□□□□ -0.41
USF1-201ENST00000368019 RAD51CO43502 376 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 BUB1O43683 1085 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 CABYRO75952 493 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 KRT14P02533 472 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 FAM153BP0C7A2 387 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 SNHG28P0DPA3 235 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 ALAS1P13196 640 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 SMPD1P17405 629 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 CXCR5P32302 372 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 ADCY7P51828 1080 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 SNAP25P60880 206 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 FAM153CQ494X1 144 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 TMEM63BQ5T3F8 832 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 IQSEC1Q6DN90 963 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 MOXD1Q6UVY6 613 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 CXCL17Q6UXB2 119 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 BTNL9Q6UXG8 535 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 ZNF365Q70YC5 407 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 FRMD5Q7Z6J6 570 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 TLK2Q86UE8 772 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 TMEM199Q8N511 208 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 CCDC26Q8TAB7 109 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 TIFAQ96CG3 184 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 KRT12Q99456 494 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 PBX4Q9BYU1 374 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 SUCLA2Q9P2R7 463 aaPredicted RBP12.46□□□□□ -0.41
USF1-201ENST00000368019 FAM153AQ9UHL3 310 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 STX8Q9UNK0 236 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 Q9Y3F1 56 aa12.46□□□□□ -0.41
USF1-201ENST00000368019 SCN10AQ9Y5Y9 1956 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 MUC3AQ02505 3323 aa12.45□□□□□ -0.42
USF1-201ENST00000368019 GTPBP10A4D1E9 387 aaKnown RBP12.45□□□□□ -0.42
USF1-201ENST00000368019 GMNCA6NCL1 334 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms