RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CBARPQ8N350 705 aaPredicted RBP6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 PRPF38AQ8NAV1 312 aaKnown RBP6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 SLC16A11Q8NCK7 471 aa6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 GPR156Q8NFN8 814 aa6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 CACTINQ8WUQ7 758 aaKnown RBP6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 FATE1Q969F0 183 aa6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 SPON1Q9HCB6 807 aa6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 SCOCQ9UIL1 159 aa6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 HDAC5Q9UQL6 1122 aa6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 WASHC2AQ641Q2 1341 aa6.21□□□□□ -1.42
RNU4-28P-201ENST00000364739 RPS6KA4O75676 772 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 IPO13O94829 963 aaKnown RBP6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 MT-CO1P00395 513 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 MTHFD2P13995 350 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 PTPN7P35236 360 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 MTNR1BP49286 362 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 ITKQ08881 620 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 MTMR1Q13613 665 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 TOB2Q14106 344 aaPredicted RBP6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 FAM83AQ86UY5 434 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 PUS7LQ9H0K6 701 aaKnown RBP6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 LDAHQ9H6V9 325 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 TRPS1Q9UHF7 1281 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 DNM3Q9UQ16 869 aa6.2□□□□□ -1.42
RNU4-28P-201ENST00000364739 NARSO43776 548 aaKnown RBP6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 ABCB5Q2M3G0 1257 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 MUM1L1Q5H9M0 696 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 RNF169Q8NCN4 708 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 OR52N2Q8NGI0 321 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 SLC35B2Q8TB61 432 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 ZNF480Q8WV37 535 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 DPF2Q92785 391 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 TMX1Q9H3N1 280 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 GREM2Q9H772 168 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 ZNF703Q9H7S9 590 aaPredicted RBP6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 PARPBPQ9NWS1 579 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 TRHDEQ9UKU6 1024 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 SORCS3Q9UPU3 1222 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 GPR45Q9Y5Y3 372 aa6.19□□□□□ -1.42
RNU4-28P-201ENST00000364739 GOLGA6L6A8MZA4 724 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 K7ESF4 209 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 LEFTY2O00292 366 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 FZD7O75084 574 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 HSP90B1P14625 803 aaKnown RBP6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 PER3P56645 1201 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 MALLQ13021 153 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 TUBA3CQ13748 450 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 SEPT2Q15019 361 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 MST1LQ2TV78 715 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 INAVAQ3KP66 663 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 TUBA3EQ6PEY2 450 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 OR2I1PQ8NGU4 316 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 MTMR8Q96EF0 704 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 MMRN2Q9H8L6 949 aa6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 RBM12Q9NTZ6 932 aaKnown RBP6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 AURKAIP1Q9NWT8 199 aaPredicted RBP6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 ING1Q9UK53 422 aaPredicted RBP6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 REXO2Q9Y3B8 237 aaKnown RBP6.18□□□□□ -1.42
RNU4-28P-201ENST00000364739 GRXCR1A8MXD5 290 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 PCDHGA12O60330 932 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 PHF2O75151 1096 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 ZNF202O95125 648 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 GASTP01350 101 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 MYBL2P10244 700 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 AGXTP21549 392 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 APOBEC3AP31941 199 aaPredicted RBP6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 MCAMP43121 646 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 ACAP2Q15057 778 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 VPS72Q15906 364 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 RABL3Q5HYI8 236 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 MBNL2Q5VZF2 373 aaKnown RBP6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 HTR3DQ70Z44 454 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 GPRIN1Q7Z2K8 1008 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 NECAB2Q7Z6G3 386 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 SYT12Q8IV01 421 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 AMOTL1Q8IY63 956 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 TRMT2AQ8IZ69 625 aaKnown RBP6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 PQLC1Q8N2U9 271 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 C1orf162Q8NEQ5 155 aaPredicted RBP6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 CPT1CQ8TCG5 803 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 FAXDC2Q96IV6 333 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 SORCS2Q96PQ0 1159 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 UHRF1Q96T88 793 aaPredicted RBP6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 ADI1Q9BV57 179 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 KCNH6Q9H252 994 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 ZNF768Q9H5H4 540 aaKnown RBP6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 PCDH12Q9NPG4 1184 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 MKS1Q9NXB0 559 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 ZBTB21Q9ULJ3 1066 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 PCDHGA9Q9Y5G4 932 aaKnown RBP6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 PCDHGA8Q9Y5G5 932 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 PCDHGA7Q9Y5G6 932 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 PCDHGA6Q9Y5G7 932 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 PCDHGA3Q9Y5H0 932 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 COL4A3BPQ9Y5P4 624 aa6.17□□□□□ -1.42
RNU4-28P-201ENST00000364739 TBKBP1A7MCY6 615 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 PRR5-ARHGAP8B1AHC4 643 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 SCAF4O95104 1147 aaKnown RBP6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 NR4A1P22736 598 aa6.16□□□□□ -1.42
RNU4-28P-201ENST00000364739 ECHS1P30084 290 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms