RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 C4orf33Q8N1A6 199 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 OGFOD1Q8N543 542 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 ATL2Q8NHH9 583 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 C11orf70Q9BRQ4 267 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 QTRT2Q9H974 415 aaKnown RBP12.78□□□□□ -0.36
EPHB4-202ENST00000360620 MRPL47Q9HD33 250 aaKnown RBP12.78□□□□□ -0.36
EPHB4-202ENST00000360620 GOLGA8SH3BPF8 625 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 GOLGA8MH3BSY2 632 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 RIPK2O43353 540 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 PPFIA2O75334 1257 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 BBOX1O75936 387 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
EPHB4-202ENST00000360620 AGAP11Q8TF27 550 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 PYROXD1Q8WU10 500 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 ATG4AQ8WYN0 398 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 ARHGEF26Q96DR7 871 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 RBM15Q96T37 977 aaKnown RBP eCLIP12.78□□□□□ -0.365e-11■■□□□ 11.5
EPHB4-202ENST00000360620 SH2D3AQ9BRG2 576 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 TRABDQ9H4I3 376 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 PCDHB4Q9Y5E5 795 aa12.78□□□□□ -0.36
EPHB4-202ENST00000360620 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.36
EPHB4-202ENST00000360620 CFAP69A5D8W1 941 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 TBX3O15119 743 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 OPHN1O60890 802 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 LIG4P49917 911 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 STAT2P52630 851 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 XRCC4Q13426 336 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 LGSNQ5TDP6 509 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 AADACL2Q6P093 401 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 CYFIP1Q7L576 1253 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 PASD1Q8IV76 773 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 PRCCQ92733 491 aaPredicted RBP12.77□□□□□ -0.36
EPHB4-202ENST00000360620 LXNQ9BS40 222 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 TRIM55Q9BYV6 548 aa12.77□□□□□ -0.36
EPHB4-202ENST00000360620 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.36
EPHB4-202ENST00000360620 RASSF9O75901 435 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 MT-ND3P03897 115 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 PIK3CAP42336 1068 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 SLC8A3P57103 927 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 KCNJ2P63252 427 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 RINT1Q6NUQ1 792 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 AGGF1Q8N302 714 aaeCLIP12.77□□□□□ -0.37
EPHB4-202ENST00000360620 ATP8B4Q8TF62 1192 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 HAS1Q92839 578 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 AGPAT3Q9NRZ7 376 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 SLC12A6Q9UHW9 1150 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 MCM8Q9UJA3 840 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 ZC3H4Q9UPT8 1303 aaKnown RBP12.77□□□□□ -0.37
EPHB4-202ENST00000360620 SLC16A4O15374 487 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 SNX3O60493 162 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 HAUS5O94927 633 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 ALAS1P13196 640 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.37
EPHB4-202ENST00000360620 FNTAP49354 379 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 KCNA1Q09470 495 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 BRDTQ58F21 947 aaPredicted RBP12.77□□□□□ -0.37
EPHB4-202ENST00000360620 KRT35Q92764 455 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 CENPTQ96BT3 561 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 FAM81BQ96LP2 452 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 RTFDC1Q9BY42 306 aaPredicted RBP12.77□□□□□ -0.37
EPHB4-202ENST00000360620 ADAM22Q9P0K1 906 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 TXNDC16Q9P2K2 825 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 UVRAGQ9P2Y5 699 aa12.77□□□□□ -0.37
EPHB4-202ENST00000360620 CNOT7Q9UIV1 285 aaKnown RBP12.77□□□□□ -0.37
EPHB4-202ENST00000360620 BCL9O00512 1426 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 MAP3K7O43318 606 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 GH2P01242 217 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 RASA3Q14644 834 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 ECM1Q16610 540 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 LONP2Q86WA8 852 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 ZBED8Q8IZ13 594 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 CCDC110Q8TBZ0 833 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 TTC17Q96AE7 1141 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.76□□□□□ -0.37
EPHB4-202ENST00000360620 GTPBP10A4D1E9 387 aaKnown RBP12.76□□□□□ -0.37
EPHB4-202ENST00000360620 BTNL10A8MVZ5 291 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 LMNAP02545 664 aaKnown RBP12.76□□□□□ -0.37
EPHB4-202ENST00000360620 SERPINB2P05120 415 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 ERFP50548 548 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 GPS1Q13098 491 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 TRPC3Q13507 836 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 ALCAMQ13740 583 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 WDR78Q5VTH9 848 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 EP400NLQ6ZTU2 488 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 MAML1Q92585 1016 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 SH3GL3Q99963 347 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 KMT5AQ9NQR1 393 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 MYH2Q9UKX2 1941 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
EPHB4-202ENST00000360620 EIF3DO15371 548 aaKnown RBP eCLIP12.76□□□□□ -0.37
EPHB4-202ENST00000360620 BASP1P80723 227 aaKnown RBP12.76□□□□□ -0.37
EPHB4-202ENST00000360620 SATB1Q01826 763 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 KLC1Q07866 573 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 CFAP157Q5JU67 520 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 KRT39Q6A163 491 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 TMEM179Q6ZVK1 233 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
EPHB4-202ENST00000360620 LRRC15Q8TF66 581 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms