RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SRBD1Q8N5C6 995 aaKnown RBP6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 OLIG1Q8TAK6 271 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 UBAC1Q9BSL1 405 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 COLEC11Q9BWP8 271 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 LRRC3Q9BY71 257 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 DHX33Q9H6R0 707 aaKnown RBP6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 RSAD1Q9HA92 442 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 TSHZ2Q9NRE2 1034 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 USP18Q9UMW8 372 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 FAN1Q9Y2M0 1017 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 MOSPD3O75425 235 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 LYPLA2O95372 231 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 RFC5P40937 340 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 SPEM2Q0P670 501 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 USP17L6PQ6QN14 398 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 MFSD6LQ8IWD5 586 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 TCEAL8Q8IYN2 117 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 STK11IPQ8N1F8 1099 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 PHKBQ93100 1093 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 CLSTN3Q9BQT9 956 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 NRBP2Q9NSY0 501 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 CAPN8A6NHC0 703 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 PAX3P23760 479 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 CXCL12P48061 93 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 METAP2P50579 478 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 RING1Q06587 406 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 KIZQ2M2Z5 673 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 EFCAB12Q6NXP0 572 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 CD300LGQ6UXG3 332 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 PROSER1Q86XN7 944 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 UROC1Q96N76 676 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 ASB16Q96NS5 453 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZMYND12Q9H0C1 365 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 RTEL1Q9NZ71 1219 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 PCDHB2Q9Y5E7 798 aa6.75□□□□□ -1.33
CDC42SE2-201ENST00000360515 A0A087WV48 116 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 C1QTNF9BB2RNN3 333 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 C1QTNF9P0C862 333 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 USP11P51784 963 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 TSGA10IPQ3SY00 556 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 RASSF3Q86WH2 238 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 IRF7Q92985 503 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 RBM28Q9NW13 759 aaKnown RBP6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 BARHL2Q9NY43 387 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 LHX6Q9UPM6 363 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 DOCK6Q96HP0 2047 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 WDR27A2RRH5 827 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 WDR64B1ANS9 1081 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 SH2B2O14492 632 aaPredicted RBP6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 PSMD10O75832 226 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 FGF19O95750 216 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 WEE2P0C1S8 567 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 NLRP11P59045 1033 aaKnown RBP6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 XKR3Q5GH77 459 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 TPRG1Q6ZUI0 275 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 TAS1R1Q7RTX1 841 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 FCHSD1Q86WN1 690 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 OTUD7AQ8TE49 926 aaPredicted RBP6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZBTB10Q96DT7 871 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 RPP25Q9BUL9 199 aaKnown RBP6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 ANO3Q9BYT9 981 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 PLA2G2FQ9BZM2 168 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 TBX20Q9UMR3 447 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 EPG5Q9HCE0 2579 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 CACNA1IQ9P0X4 2223 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 BCLAF3A2AJT9 711 aaKnown RBP6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 M0R2N6 131 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 LRRN2O75325 713 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 MARK3P27448 753 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 TPGS2Q68CL5 300 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 FUT10Q6P4F1 479 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 DAGLBQ8NCG7 672 aa6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 DNMT3BQ9UBC3 853 aaKnown RBP6.74□□□□□ -1.33
CDC42SE2-201ENST00000360515 MAP1BP46821 2468 aaKnown RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 FAM86B1E9PN63 330 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZNF197O14709 1029 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 TRDMT1O14717 391 aaKnown RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 FAM86B2P0C5J1 330 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 GBP2P32456 591 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 CHMP4BP1P59074 171 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 SATB1Q01826 763 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 NFX1Q12986 1120 aaKnown RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 SEMA3BQ13214 749 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 SIM2Q14190 667 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZNF268Q14587 947 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 CATIPQ7Z7H3 387 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 SCUBE3Q8IX30 993 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 ADAM32Q8TC27 787 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 APOL5Q9BWW9 433 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 ADAM28Q9UKQ2 775 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 ITPR1Q14643 2758 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 SPDYE3A6NKU9 549 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 SF3B1O75533 1304 aaKnown RBP eCLIP6.73□□□□□ -1.333e-7■■■■■ 66.4
CDC42SE2-201ENST00000360515 PLCB2Q00722 1185 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 SNW1Q13573 536 aaKnown RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 CDCA2Q69YH5 1023 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 ZNF654Q8IZM8 581 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 OXER1Q8TDS5 423 aa6.73□□□□□ -1.33
CDC42SE2-201ENST00000360515 TSPAN18Q96SJ8 248 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms