RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 UBE2TQ9NPD8 197 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 CHORDC1Q9UHD1 332 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 TBK1Q9UHD2 729 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 COL5A3P25940 1745 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 FOXO6A8MYZ6 492 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 RWDD2BP57060 319 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 IL9RQ01113 521 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 CETN1Q12798 172 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 MKRN4PQ13434 485 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 NFIXQ14938 502 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 TCEAL1Q15170 157 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 KYNUQ16719 465 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 Q4G0T1 1027 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 SGO2Q562F6 1265 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 SLC51AQ86UW1 340 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 KSR1Q8IVT5 923 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 LMNTD2Q8IXW0 634 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 SRRM1Q8IYB3 904 aaKnown RBP10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 SNF8Q96H20 258 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 EIF2AK1Q9BQI3 630 aaKnown RBP10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 PARVGQ9HBI0 331 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 AAASQ9NRG9 546 aa10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 DNAJC17Q9NVM6 304 aaKnown RBP10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 SRP68Q9UHB9 627 aaKnown RBP10.64□□□□□ -0.71
TRAPPC2-201ENST00000359680 RGL2O15211 777 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 ATMINO43313 823 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 EXOC3O60645 756 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 PCK1P35558 622 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 CHKAP35790 457 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 ABL2P42684 1182 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 VASPP50552 380 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 GABPAQ06546 454 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 ADCY1Q08828 1119 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 MGAT5Q09328 741 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 BFSP1Q12934 665 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 GRAPQ13588 217 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 SNX1Q13596 522 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 MPP2Q14168 576 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 PARP6Q2NL67 630 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 AP1ARQ63HQ0 302 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 CGB2Q6NT52 195 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 FAM47EQ6ZV65 393 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 FAM178BQ8IXR5 827 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 AGGF1Q8N302 714 aaeCLIP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 MARCH10Q8NA82 808 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 RDH13Q8NBN7 331 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 ZNF564Q8TBZ8 553 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 GRAPLQ8TC17 118 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 PIGOQ8TEQ8 1089 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 VTI1AQ96AJ9 217 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 FAM163AQ96GL9 167 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 PAIP2Q9BPZ3 127 aaKnown RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 CCDC77Q9BR77 488 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 POLR3CQ9BUI4 534 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 LRRC19Q9H756 370 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 RNPEPL1Q9HAU8 725 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 EIF4E1BA6NMX2 242 aaKnown RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 CDH16O75309 829 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 CALB2P22676 271 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 RAD23BP54727 409 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 KCNQ4P56696 695 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 LLGL1Q15334 1064 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 SIX1Q15475 284 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 C1orf54Q8WWF1 131 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 CD101Q93033 1021 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 ERP27Q96DN0 273 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 NUP85Q9BW27 656 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 MYLK2Q9H1R3 596 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 LRMDAQ9H2I8 198 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 AGPAT3Q9NRZ7 376 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 RGL1Q9NZL6 768 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 NARFQ9UHQ1 456 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 SERPINB13Q9UIV8 391 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 UBE4BO95155 1302 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 ADGRA3Q8IWK6 1321 aa10.63□□□□□ -0.71
TRAPPC2-201ENST00000359680 A0A1W2PRG0 241 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 EME2A4GXA9 379 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 A6NHS1 94 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 E7ENQ6 273 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 UBAP1LF5GYI3 381 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 MEIS2O14770 477 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 CLDN3O15551 220 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 MTA2O94776 668 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 UFL1O94874 794 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 TAC1P20366 129 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 ZNF76P36508 570 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 ITGA8P53708 1063 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 POLGP54098 1239 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 SLC15A2Q16348 729 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 MAEAQ7L5Y9 396 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 SYCP3Q8IZU3 236 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 ANKRD35Q8N283 1001 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 SLCO2A1Q92959 643 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 BTBD6Q96KE9 485 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 CRAMP1Q96RY5 1269 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 GAKO14976 1311 aa10.62□□□□□ -0.71
TRAPPC2-201ENST00000359680 FAM86B1E9PN63 330 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms