RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 C22orf23Q9BZE7 217 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 PPME1Q9Y570 386 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 IPPQ9Y573 584 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 ASAP2O43150 1006 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 EDIL3O43854 480 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 DKC1O60832 514 aaKnown RBP eCLIP17.71■□□□□ 0.43
IFT20-202ENST00000357896 ERLIN2O94905 339 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.43
IFT20-202ENST00000357896 HNRNPA1P09651 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
IFT20-202ENST00000357896 AXLP30530 894 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 MLH1P40692 756 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 LAMTOR4Q0VGL1 99 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 FUT10Q6P4F1 479 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 GRASPQ7Z6J2 395 aaPredicted RBP17.71■□□□□ 0.43
IFT20-202ENST00000357896 HACE1Q8IYU2 909 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 NELL1Q92832 810 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 CCDC51Q96ER9 411 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 B3GALT6Q96L58 329 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 FAM126AQ9BYI3 521 aaPredicted RBP17.71■□□□□ 0.43
IFT20-202ENST00000357896 MINDY3Q9H8M7 445 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 USP18Q9UMW8 372 aa17.71■□□□□ 0.43
IFT20-202ENST00000357896 MTF2Q9Y483 593 aaPredicted RBP17.71■□□□□ 0.43
IFT20-202ENST00000357896 DCDC2BA2VCK2 349 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 LILRB5O75023 590 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 SCNN1GP51170 649 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 KRT32Q14532 448 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 TSGA10IPQ3SY00 556 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 LIN9Q5TKA1 542 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 PLA2G4FQ68DD2 849 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 NOTUMQ6P988 496 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 GLYCTKQ8IVS8 523 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 TCP11Q8WWU5 503 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 FGF13Q92913 245 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 CLDN23Q96B33 292 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 GPR62Q9BZJ7 368 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 LTB4R2Q9NPC1 389 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 GMEB2Q9UKD1 530 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 ADAM28Q9UKQ2 775 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 GIT1Q9Y2X7 761 aa17.7■□□□□ 0.42
IFT20-202ENST00000357896 CYP3A7-CYP3A51PA0A087WV96 503 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 XYLBO75191 536 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 ADRB1P08588 477 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 CYP3A7P24462 503 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 RFC5P40937 340 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 RPS9P46781 194 aaKnown RBP17.69■□□□□ 0.42
IFT20-202ENST00000357896 QARSP47897 775 aaKnown RBP17.69■□□□□ 0.42
IFT20-202ENST00000357896 RNF149Q8NC42 400 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 TBCKQ8TEA7 893 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 TMEM143Q96AN5 459 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 CEP170P1Q96L14 293 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 ZFP42Q96MM3 310 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 RNF39Q9H2S5 420 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 DHX33Q9H6R0 707 aaKnown RBP17.69■□□□□ 0.42
IFT20-202ENST00000357896 MRPS17Q9Y2R5 130 aaKnown RBP17.69■□□□□ 0.42
IFT20-202ENST00000357896 SPTBN2O15020 2390 aa17.69■□□□□ 0.42
IFT20-202ENST00000357896 F8W810 466 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 TADA2AO75478 443 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 RPL17P18621 184 aaKnown RBP17.68■□□□□ 0.42
IFT20-202ENST00000357896 TGM1P22735 817 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 HOXA9P31269 272 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 NPEPPSP55786 919 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 PPM1LQ5SGD2 360 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 PHF20Q9BVI0 1012 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 EIF2AQ9BY44 585 aaKnown RBP17.68■□□□□ 0.42
IFT20-202ENST00000357896 RNF26Q9BY78 433 aaPredicted RBP17.68■□□□□ 0.42
IFT20-202ENST00000357896 TRIM6Q9C030 488 aaPredicted RBP17.68■□□□□ 0.42
IFT20-202ENST00000357896 SH3GLB2Q9NR46 395 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 MIOSQ9NXC5 875 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 FBXW11Q9UKB1 542 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 RAB23Q9ULC3 237 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 MIA3Q5JRA6 1907 aa17.68■□□□□ 0.42
IFT20-202ENST00000357896 MTCL1Q9Y4B5 1905 aaKnown RBP17.68■□□□□ 0.42
IFT20-202ENST00000357896 CD72P21854 359 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 NRLP54845 237 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 NLRP5P59047 1200 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 ZNF852Q6ZMS4 543 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 FERMT3Q86UX7 667 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 ETNPPLQ8TBG4 499 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 CHAMP1Q96JM3 812 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 POLIQ9UNA4 740 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 HES2Q9Y543 173 aa17.67■□□□□ 0.42
IFT20-202ENST00000357896 SF3B1O75533 1304 aaKnown RBP eCLIP17.67■□□□□ 0.426e-6■■■■■ 103.4
IFT20-202ENST00000357896 TSPAN1O60635 241 aa17.66■□□□□ 0.42
IFT20-202ENST00000357896 TDP2O95551 362 aa17.66■□□□□ 0.42
IFT20-202ENST00000357896 C8AP07357 584 aa17.66■□□□□ 0.42
IFT20-202ENST00000357896 NTHL1P78549 312 aa17.66■□□□□ 0.42
IFT20-202ENST00000357896 GRIK3Q13003 919 aa17.66■□□□□ 0.42
IFT20-202ENST00000357896 MXD4Q14582 209 aaPredicted RBP17.66■□□□□ 0.42
IFT20-202ENST00000357896 PPP2R5DQ14738 602 aa17.66■□□□□ 0.42
IFT20-202ENST00000357896 MOXD1Q6UVY6 613 aa17.66■□□□□ 0.42
IFT20-202ENST00000357896 OTUD6AQ7L8S5 288 aa17.66■□□□□ 0.42
IFT20-202ENST00000357896 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
IFT20-202ENST00000357896 PRMT8Q9NR22 394 aaPredicted RBP17.66■□□□□ 0.42
IFT20-202ENST00000357896 KCNH3Q9ULD8 1083 aa17.66■□□□□ 0.42
IFT20-202ENST00000357896 P4HBP07237 508 aaKnown RBP17.65■□□□□ 0.42
IFT20-202ENST00000357896 POU2F2P09086 479 aa17.65■□□□□ 0.42
IFT20-202ENST00000357896 PTENP60484 403 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms