RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CCT8L1PA6NM43 557 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 GOLGA8RI6L899 631 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ORC4O43929 436 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 DTNBO60941 627 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 CDH16O75309 829 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 CYP21A2P08686 494 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 RALBP11234 206 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 PSMA3P25788 255 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 BBS7Q8IWZ6 715 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 OR6B3Q8NGW1 331 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 EEF2KMTQ96G04 330 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 MTIF3Q9H2K0 278 aaKnown RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 STK36Q9NRP7 1315 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 RSPH10B2B2RC85 870 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 RSPH10BP0C881 870 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 CHN1P15882 459 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 TYK2P29597 1187 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 LRRC14Q15048 493 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 NFRKBQ6P4R8 1299 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ENOSF1Q7L5Y1 443 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 B4GALNT2Q8NHY0 566 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ACAP3Q96P50 834 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
SMC4-202ENST00000357388 HACD3Q9P035 362 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 DLGAP2Q9P1A6 1054 aa13.57□□□□□ -0.24
SMC4-202ENST00000357388 SLC1A1P43005 524 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 TP53BP2Q13625 1128 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 LAMC2Q13753 1193 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 CLEC4FQ8N1N0 589 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 SPATA4Q8NEY3 305 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 ANKRD7Q92527 254 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 ABCC2Q92887 1545 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 ZNF839A8K0R7 811 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 ERVV-1B6SEH8 477 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
SMC4-202ENST00000357388 HNRNPH1P31943 449 aaKnown RBP13.56□□□□□ -0.24
SMC4-202ENST00000357388 DSG1Q02413 1049 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 GPS1Q13098 491 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 TRIP10Q15642 601 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 CCDC103Q8IW40 242 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 RSPH1Q8WYR4 309 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 RFFLQ8WZ73 363 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 IFT43Q96FT9 208 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 ZFYVE19Q96K21 471 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 PIGSQ96S52 555 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 TRIM54Q9BYV2 358 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 PIDD1Q9HB75 910 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 DCDC2Q9UHG0 476 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 PLXNC1O60486 1568 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 EIF4E1BA6NMX2 242 aaKnown RBP13.56□□□□□ -0.24
SMC4-202ENST00000357388 PHKA2P46019 1235 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 RAD51Q06609 339 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 SLC10A5Q5PT55 438 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 TMEM179Q6ZVK1 233 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 EEPD1Q7L9B9 569 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 PIM2Q9P1W9 311 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 CTCFP49711 727 aaPredicted RBP13.56□□□□□ -0.24
SMC4-202ENST00000357388 ALDH18A1P54886 795 aaKnown RBP13.56□□□□□ -0.24
SMC4-202ENST00000357388 NCAPHQ15003 741 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 TRIM71Q2Q1W2 868 aaKnown RBP13.56□□□□□ -0.24
SMC4-202ENST00000357388 ERFEQ4G0M1 354 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 TTC30AQ86WT1 665 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 MCPH1Q8NEM0 835 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 CLMNQ96JQ2 1002 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 FAM49AQ9H0Q0 323 aaPredicted RBP13.56□□□□□ -0.24
SMC4-202ENST00000357388 EPS8L2Q9H6S3 715 aa13.56□□□□□ -0.24
SMC4-202ENST00000357388 SPAG6O75602 509 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 COPB2P35606 906 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 PTPN21Q16825 1174 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 HEATR6Q6AI08 1181 aaKnown RBP13.55□□□□□ -0.24
SMC4-202ENST00000357388 MASTLQ96GX5 879 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 DDX47Q9H0S4 455 aaKnown RBP13.55□□□□□ -0.24
SMC4-202ENST00000357388 RAD21L1Q9H4I0 556 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 MLXIPLQ9NP71 852 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 DENND3A2RUS2 1198 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 KCNA2P16389 499 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 SLC9A1P19634 815 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 AP3B2Q13367 1082 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 STXBP2Q15833 593 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 RWDD4Q6NW29 188 aaKnown RBP13.55□□□□□ -0.24
SMC4-202ENST00000357388 CYGBQ8WWM9 190 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 NLRP4Q96MN2 994 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 NUP85Q9BW27 656 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 APOA4P06727 396 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 ST13P50502 369 aaKnown RBP13.55□□□□□ -0.24
SMC4-202ENST00000357388 GPR141Q7Z602 305 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 TADA1Q96BN2 335 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 SFMBT1Q9UHJ3 866 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 PNMA6FA0A0J9YX94 578 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 KRT87PA6NCN2 255 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 H0YC42 278 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 HUS1O60921 280 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 SNUPNO95149 360 aaKnown RBP13.55□□□□□ -0.24
SMC4-202ENST00000357388 CD58P19256 250 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 OSTNP61366 133 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 VSNL1P62760 191 aa13.55□□□□□ -0.24
SMC4-202ENST00000357388 MRPS25P82663 173 aaKnown RBP13.55□□□□□ -0.24
SMC4-202ENST00000357388 KDSRQ06136 332 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms