RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 GDAQ9Y2T3 454 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 MAP4P27816 1152 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 DSG1Q02413 1049 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 CUL1Q13616 776 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 DARS2Q6PI48 645 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 SIX6OS1Q8N1H7 587 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 DNAAF3Q8N9W5 541 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 SDCCAG3Q96C92 435 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 ZFYVE19Q96K21 471 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 PHACTR1Q9C0D0 580 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 IFT122Q9HBG6 1241 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 A1CFQ9NQ94 594 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 GOLGA8TH3BQL2 631 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 IGF2BP3O00425 579 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 SCNN1BP51168 640 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 CYP27A1Q02318 531 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 DCTN2Q13561 401 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 GATAD2AQ86YP4 633 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 KPNA4O00629 521 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 RPS6KA5O75582 802 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 INHBAP08476 426 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 PMS2P54278 862 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 PLTPP55058 493 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 TOB2Q14106 344 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 C15orf59Q2T9L4 293 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 C2orf69Q8N8R5 385 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 DCAF4Q8WV16 495 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 SERPINI1Q99574 410 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 GALNT8Q9NY28 637 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 RABGEF1Q9UJ41 708 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 FIS1Q9Y3D6 152 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 GOLGA8RI6L899 631 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 CASP2P42575 452 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 ADRM1Q16186 407 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 LRRC8BQ6P9F7 803 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 TCAIMQ8N3R3 496 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 OR6B3Q8NGW1 331 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 HSPH1Q92598 858 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 POLIQ9UNA4 740 aa11.76□□□□□ -0.53
SMARCE1-202ENST00000348513 ZBTB5O15062 677 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CHRNA5P30532 468 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 GARSP41250 739 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 RAB27AP51159 221 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CLEC17AQ6ZS10 378 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CATSPER4Q7RTX7 472 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 ZBTB8BQ8NAP8 495 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 IPO11Q9UI26 975 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 HNRNPRO43390 633 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 TTC4O95801 387 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 S100A9P06702 114 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 PTGS2P35354 604 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 RAB14P61106 215 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CUL4AQ13619 759 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 ARID5BQ14865 1188 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 GSPT2Q8IYD1 628 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CDKL2Q92772 493 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CAAP1Q9H8G2 361 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 STMN3Q9NZ72 180 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 RNF14Q9UBS8 474 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CIDEBQ9UHD4 219 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 TMED5Q9Y3A6 229 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 WDR91A4D1P6 747 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 TRIM64CA6NLI5 447 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 TAF4O00268 1085 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 MED7O43513 233 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 ASNA1O43681 348 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CCNE1P24864 410 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 MPP3Q13368 585 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 LMBRD2Q68DH5 695 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 OTUD5Q96G74 571 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CPSF3Q9UKF6 684 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 TRIM49BA6NDI0 452 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 PFDN6O15212 129 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CBFA2T3O75081 653 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 ATP1A3P13637 1013 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 ARL4AP40617 200 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 KCTD21Q4G0X4 260 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 AP1M1Q9BXS5 423 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 PITPNM3Q9BZ71 974 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 UBN1Q9NPG3 1134 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 COMMD3-BMI1R4GMX3 469 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 IKBKBO14920 756 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 CCDC166P0CW27 439 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 STAT3P40763 770 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 VSNL1P62760 191 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 SPP2Q13103 211 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 SLC12A1Q13621 1099 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 FOXR1Q6PIV2 292 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 TRPM8Q7Z2W7 1104 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 LRRC37BQ96QE4 947 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 RANBP17Q9H2T7 1088 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 PNMA3Q9UL41 463 aa11.75□□□□□ -0.53
SMARCE1-202ENST00000348513 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 ANXA13P27216 316 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 JADE1Q6IE81 842 aa11.74□□□□□ -0.53
SMARCE1-202ENST00000348513 DGKHQ86XP1 1220 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms