RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CYFIP1Q7L576 1253 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 FAM71AQ8IYT1 594 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 MYCBPAPQ8TBZ2 947 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 TAF4BQ92750 862 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 MAGOHBQ96A72 148 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 MKNK1Q9BUB5 465 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 DDX23Q9BUQ8 820 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 DEFB129Q9H1M3 183 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 RASSF4Q9H2L5 321 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 ACBD3Q9H3P7 528 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 DNAJC17Q9NVM6 304 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 PNMA2Q9UL42 364 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 ODF2LQ9ULJ1 636 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 TRPC6Q9Y210 931 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 R3HDM2Q9Y2K5 976 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 FRMD4BQ9Y2L6 1034 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 MRPL11Q9Y3B7 192 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 ANKRD62A6NC57 917 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 SMIM23A6NLE4 172 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 DNM1LO00429 736 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 P4HBP07237 508 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 IVLP07476 585 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CHKAP35790 457 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 NCKAP1LP55160 1127 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 BAATQ14032 418 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 SNRNP35Q16560 246 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CCDC38Q502W7 563 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 JAMLQ86YT9 394 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 PPM1KQ8N3J5 372 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 EPS8L3Q8TE67 593 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 PARD3BQ8TEW8 1205 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CPA5Q8WXQ8 436 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CNKSR1Q969H4 720 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 IGSF5Q9NSI5 407 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 USP34Q70CQ2 3546 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 MYH9P35579 1960 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 LOXHD1Q8IVV2 1947 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 TESPA1A2RU30 521 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CETPP11597 493 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CYP11B1P15538 503 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 SLCO1A2P46721 670 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 QARSP47897 775 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 TNNC1P63316 161 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 DRP2Q13474 957 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 SLC29A2Q14542 456 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 ATP13A4Q4VNC1 1196 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 PCNX4Q63HM2 1172 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CCDC60Q8IWA6 550 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 GLIS1Q8NBF1 620 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 WHAMMQ8TF30 809 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CHURC1Q8WUH1 139 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 C1orf54Q8WWF1 131 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 PSPC1Q8WXF1 523 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 RAPGEF5Q92565 580 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 RUBCNQ92622 972 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 RIT2Q99578 217 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 PDCD2LQ9BRP1 358 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 OSBPL7Q9BZF2 842 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 TMX4Q9H1E5 349 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 MYOZ2Q9NPC6 264 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 PXMP2Q9NR77 195 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CHST7Q9NS84 486 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CTNNAL1Q9UBT7 734 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 FEM1BQ9UK73 627 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 TTC7AQ9ULT0 858 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 TBX20Q9UMR3 447 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 MROH7Q68CQ1 1323 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 OPA1O60313 960 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 TBC1D12O60347 775 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 PPFIA2O75334 1257 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CTNNA2P26232 953 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 NF2P35240 595 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 MAGEA9P43362 315 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 DR1Q01658 176 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 SNX1Q13596 522 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 PPP2R5AQ15172 486 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 TRIP13Q15645 432 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 ZNF568Q3ZCX4 644 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 C6orf89Q6UWU4 347 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CRELD2Q6UXH1 353 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 SEPT14Q6ZU15 432 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 SV2AQ7L0J3 742 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 NLRP14Q86W24 1093 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CALR3Q96L12 384 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 ERP44Q9BS26 406 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 EPN3Q9H201 632 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 APOBEC3GQ9HC16 384 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 PDLIM7Q9NR12 457 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CTTNBP2NLQ9P2B4 639 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 DDX20Q9UHI6 824 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 DBR1Q9UK59 544 aaKnown RBP6.51□□□□□ -1.37
CLCN3-201ENST00000347613 INTUQ9ULD6 942 aa6.51□□□□□ -1.37
CLCN3-201ENST00000347613 CCDC169A6NNP5 214 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 NDUFAB1O14561 156 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 CLDN3O15551 220 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 VNN1O95497 513 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 DLATP10515 647 aaKnown RBP6.5□□□□□ -1.37
CLCN3-201ENST00000347613 LMNB1P20700 586 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 XKR9Q5GH70 373 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 CCDC70Q6NSX1 233 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms