RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 RRM2BQ7LG56 351 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 TTC7AQ9ULT0 858 aaPredicted RBP24.47■■□□□ 1.51
NPAS3-201ENST00000346562 KCNA2P16389 499 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 SULT1E1P49888 294 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 PDIA2Q13087 525 aaKnown RBP24.46■■□□□ 1.51
NPAS3-201ENST00000346562 DDIASQ8IXT1 998 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 OR6P1Q8NGX9 317 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 PFASO15067 1338 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 ZC3H4Q9UPT8 1303 aaKnown RBP24.46■■□□□ 1.51
NPAS3-201ENST00000346562 PRCPP42785 496 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 SP8Q8IXZ3 490 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 ATP11CQ8NB49 1132 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 HAUS5O94927 633 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 ANKRD40Q6AI12 368 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 BPIFA3Q9BQP9 254 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 SENP1Q9P0U3 644 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 CLCA2Q9UQC9 943 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 CFAP65Q6ZU64 1925 aaKnown RBP24.46■■□□□ 1.51
NPAS3-201ENST00000346562 PSMD3O43242 534 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 C1orf146Q5VVC0 180 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 TAGAPQ8N103 731 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 SMYD3Q9H7B4 428 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 TRPC7Q9HCX4 862 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 TUFT1Q9NNX1 390 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 WARS2Q9UGM6 360 aaKnown RBP24.46■■□□□ 1.51
NPAS3-201ENST00000346562 CPSF1Q10570 1443 aaKnown RBP24.46■■□□□ 1.51
NPAS3-201ENST00000346562 SEMA3FQ13275 785 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 ANO4Q32M45 955 aa24.46■■□□□ 1.51
NPAS3-201ENST00000346562 PIN4Q9Y237 131 aaKnown RBP24.46■■□□□ 1.51
NPAS3-201ENST00000346562 CLCN6P51797 869 aa24.45■■□□□ 1.51
NPAS3-201ENST00000346562 EPHA7Q15375 998 aa24.45■■□□□ 1.51
NPAS3-201ENST00000346562 SRPK1Q96SB4 655 aaKnown RBP24.45■■□□□ 1.51
NPAS3-201ENST00000346562 LY9Q9HBG7 655 aa24.45■■□□□ 1.51
NPAS3-201ENST00000346562 NMT2O60551 498 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 ZBTB7AO95365 584 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 FTLP02792 175 aaPredicted RBP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 PRKCBP05771 671 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 ATP1A3P13637 1013 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 TRMT2AQ8IZ69 625 aaKnown RBP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 KIF2CQ99661 725 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 SELENONQ9NZV5 590 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 TSR3Q9UJK0 312 aaKnown RBP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 GNL1P36915 607 aaPredicted RBP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 KRT72Q14CN4 511 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 TKFCQ3LXA3 575 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 JPH1Q9HDC5 661 aaPredicted RBP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 FAM187AA6NFU0 413 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 DIAPH2O60879 1101 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 TMED1Q13445 227 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 FASTKD1Q53R41 847 aaKnown RBP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 TBC1D1Q86TI0 1168 aaPredicted RBP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 ZBED8Q8IZ13 594 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 ABTB1Q969K4 478 aaPredicted RBP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.5
NPAS3-201ENST00000346562 ARHGAP10A1A4S6 786 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 TPI1P60174 286 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 MED21Q13503 144 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 RGS9BPQ6ZS82 235 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 MFN1Q8IWA4 741 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 SLC4A7Q9Y6M7 1214 aa24.45■■□□□ 1.5
NPAS3-201ENST00000346562 SPATA31A3Q5VYP0 1347 aa24.44■■□□□ 1.5
NPAS3-201ENST00000346562 MAP4P27816 1152 aaKnown RBP24.44■■□□□ 1.5
NPAS3-201ENST00000346562 STX19Q8N4C7 294 aa24.44■■□□□ 1.5
NPAS3-201ENST00000346562 DACH2Q96NX9 599 aa24.44■■□□□ 1.5
NPAS3-201ENST00000346562 APPL2Q8NEU8 664 aa24.44■■□□□ 1.5
NPAS3-201ENST00000346562 THOC1Q96FV9 657 aaKnown RBP24.44■■□□□ 1.5
NPAS3-201ENST00000346562 ADA2Q9NZK5 511 aa24.44■■□□□ 1.5
NPAS3-201ENST00000346562 STILQ15468 1287 aa24.44■■□□□ 1.5
NPAS3-201ENST00000346562 AIPL1Q9NZN9 384 aa24.44■■□□□ 1.5
NPAS3-201ENST00000346562 TXNRD1Q16881 649 aa24.44■■□□□ 1.5
NPAS3-201ENST00000346562 YY1AP1Q9H869 796 aa24.44■■□□□ 1.5
NPAS3-201ENST00000346562 MEI1Q5TIA1 1274 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 SARM1Q6SZW1 724 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 RPAINQ86UA6 219 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 SRGAP2O75044 1071 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 CDH6P55285 790 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 NUDCD3Q8IVD9 361 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 STXBP3O00186 592 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 TXNP10599 105 aaKnown RBP24.43■■□□□ 1.5
NPAS3-201ENST00000346562 ARL4DP49703 201 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 BRINP3Q76B58 766 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 CPVLQ9H3G5 476 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 HLA-DPA1P20036 260 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 YWHABP31946 246 aaKnown RBP24.43■■□□□ 1.5
NPAS3-201ENST00000346562 POLE2P56282 527 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 CYFIP1Q7L576 1253 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 EHD2Q9NZN4 543 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 ASMTLO95671 621 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 FAM47EQ6ZV65 393 aa24.43■■□□□ 1.5
NPAS3-201ENST00000346562 ZNF668Q96K58 619 aaPredicted RBP24.43■■□□□ 1.5
NPAS3-201ENST00000346562 NOP53Q9NZM5 478 aaKnown RBP24.43■■□□□ 1.5
NPAS3-201ENST00000346562 TOB2Q14106 344 aaPredicted RBP24.42■■□□□ 1.5
NPAS3-201ENST00000346562 SCFD1Q8WVM8 642 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 FOPNLQ96NB1 174 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 KIF1BO60333 1816 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 ATICP31939 592 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 RNF135Q8IUD6 432 aa24.42■■□□□ 1.5
NPAS3-201ENST00000346562 CELF1Q92879 486 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms