RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 HSPA9P38646 679 aaKnown RBP16.46■□□□□ 0.23
SRPK1-201ENST00000346162 PPP4CP60510 307 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 DRAP1Q14919 205 aaPredicted RBP16.46■□□□□ 0.23
SRPK1-201ENST00000346162 KPNB1Q14974 876 aaKnown RBP16.46■□□□□ 0.23
SRPK1-201ENST00000346162 CCDC125Q86Z20 511 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 LXNQ9BS40 222 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 MIF4GDA9UHW6 222 aaKnown RBP16.46■□□□□ 0.23
SRPK1-201ENST00000346162 SLC16A4O15374 487 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 NDUFB10O96000 172 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 CD58P19256 250 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 ZCWPW2Q504Y3 356 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 CEP55Q53EZ4 464 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 TRAPPC11Q7Z392 1133 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 LRRC34Q8IZ02 419 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 EHD2Q9NZN4 543 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 PPP1R3GB7ZBB8 358 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 EYA4O95677 639 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 PSMC1P62191 440 aaKnown RBP16.46■□□□□ 0.23
SRPK1-201ENST00000346162 KRT76Q01546 638 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 MMEL1Q495T6 779 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 RABGAP1LQ5R372 815 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 ARMC3Q5W041 872 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 ZBTB33Q86T24 672 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 TRIM50Q86XT4 487 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 FBXL16Q8N461 479 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 THAP11Q96EK4 314 aa16.46■□□□□ 0.23
SRPK1-201ENST00000346162 TRIM56Q9BRZ2 755 aaKnown RBP16.46■□□□□ 0.23
SRPK1-201ENST00000346162 KRT10P13645 584 aa16.46■□□□□ 0.22
SRPK1-201ENST00000346162 ATP4AP20648 1035 aa16.46■□□□□ 0.22
SRPK1-201ENST00000346162 MARK3P27448 753 aa16.46■□□□□ 0.22
SRPK1-201ENST00000346162 CDC42EP5Q6NZY7 148 aa16.46■□□□□ 0.22
SRPK1-201ENST00000346162 YTHDF3Q7Z739 585 aaKnown RBP16.46■□□□□ 0.22
SRPK1-201ENST00000346162 SLITRK6Q9H5Y7 841 aa16.46■□□□□ 0.22
SRPK1-201ENST00000346162 TBC1D23Q9NUY8 699 aa16.46■□□□□ 0.22
SRPK1-201ENST00000346162 CAPN9O14815 690 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 TRIM49P0CI25 452 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 TRIM49CP0CI26 452 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 PGM1P36871 562 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 EPHB1P54762 984 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 SEC23AQ15436 765 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 MSTO1Q9BUK6 570 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 AKT3Q9Y243 479 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 PDXKO00764 312 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 AGTP01019 485 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 OSTNP61366 133 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 Q4G0T1 1027 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 STRIP1Q5VSL9 837 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 NUDCD3Q8IVD9 361 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 TRAIPQ9BWF2 469 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 A1CFQ9NQ94 594 aaKnown RBP16.45■□□□□ 0.22
SRPK1-201ENST00000346162 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
SRPK1-201ENST00000346162 MAN1A2O60476 641 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 KRT1P04264 644 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 SPP2Q13103 211 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 NR1H3Q13133 447 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 SLFN12LQ6IEE8 588 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 NYAP2Q9P242 653 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
SRPK1-201ENST00000346162 S100BP04271 92 aaPredicted RBP16.45■□□□□ 0.22
SRPK1-201ENST00000346162 GPC5P78333 572 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 TRIP13Q15645 432 aaPredicted RBP16.45■□□□□ 0.22
SRPK1-201ENST00000346162 BZW1Q7L1Q6 419 aaKnown RBP16.45■□□□□ 0.22
SRPK1-201ENST00000346162 TRIM74Q86UV6 250 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 TRIM73Q86UV7 250 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 SLC26A7Q8TE54 656 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 RNF146Q9NTX7 359 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 TFR2Q9UP52 801 aa16.45■□□□□ 0.22
SRPK1-201ENST00000346162 JCADQ9P266 1359 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 NPHP3-ACAD11A0A0J9YXS1 232 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 EEF1B2P24534 225 aaKnown RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 SMARCA1P28370 1054 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 HHIPL2Q6UWX4 724 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 GABPB2Q8TAK5 448 aaPredicted RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 ANKRD27Q96NW4 1050 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 ZNF277Q9NRM2 450 aaPredicted RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 CNOT8Q9UFF9 292 aaKnown RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 KRT75O95678 551 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 SYF2O95926 243 aaKnown RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 VAMP7P51809 220 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 YWHAGP61981 247 aaKnown RBP eCLIP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 EPHA7Q15375 998 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 LDHDQ86WU2 507 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 RFX6Q8HWS3 928 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 GLYCTKQ8IVS8 523 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 ZNF483Q8TF39 744 aaPredicted RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 KCND1Q9NSA2 647 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 EPS15L1Q9UBC2 864 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 GIPC1O14908 333 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 HNRNPCL1O60812 293 aaKnown RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 UBOX5O94941 541 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 CACNA2D1P54289 1103 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 GSCP56915 257 aaPredicted RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 CCNA1P78396 465 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 ELF3P78545 371 aaPredicted RBP16.44■□□□□ 0.22
SRPK1-201ENST00000346162 GEN1Q17RS7 908 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 EXOC8Q8IYI6 725 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms