RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 MAPRE2Q15555 327 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 SLC44A4Q53GD3 710 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 TRIM65Q6PJ69 517 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 PADI6Q6TGC4 694 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 ENOSF1Q7L5Y1 443 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 BBS5Q8N3I7 341 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 NAF1Q96HR8 494 aaKnown RBP18.49■□□□□ 0.55
SPAST-202ENST00000345662 K7ERI5 159 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 XPOTO43592 962 aaKnown RBP18.49■□□□□ 0.55
SPAST-202ENST00000345662 PRELPP51888 382 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 MTERF2Q49AM1 385 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 ZNF394Q53GI3 561 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 ZBTB33Q86T24 672 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 ACAP3Q96P50 834 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 SERPINB12Q96P63 405 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 DHX36Q9H2U1 1008 aaKnown RBP18.49■□□□□ 0.55
SPAST-202ENST00000345662 SLC9A2Q9UBY0 812 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 ARHGAP26Q9UNA1 814 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 MAP3K4Q9Y6R4 1608 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 ORC4O43929 436 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 ROR1Q01973 937 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 KIRREL3Q8IZU9 778 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 CAVIN3Q969G5 261 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 CDHR1Q96JP9 859 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 DCP1AQ9NPI6 582 aaPredicted RBP18.49■□□□□ 0.55
SPAST-202ENST00000345662 DMGDHQ9UI17 866 aaKnown RBP18.49■□□□□ 0.55
SPAST-202ENST00000345662 ZNF229Q9UJW7 825 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 EMSYQ7Z589 1322 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 H3BRJ5 948 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 GNAT1P11488 350 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 MAP4P27816 1152 aaKnown RBP18.48■□□□□ 0.55
SPAST-202ENST00000345662 TYK2P29597 1187 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 SRBD1Q8N5C6 995 aaKnown RBP18.48■□□□□ 0.55
SPAST-202ENST00000345662 PAPOLBQ9NRJ5 636 aaKnown RBP18.48■□□□□ 0.55
SPAST-202ENST00000345662 NEU2Q9Y3R4 380 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 IL10P22301 178 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 TARSP26639 723 aaKnown RBP18.48■□□□□ 0.55
SPAST-202ENST00000345662 PAPOLAP51003 745 aaKnown RBP18.48■□□□□ 0.55
SPAST-202ENST00000345662 ERBB3P21860 1342 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 DCAF8L1A6NGE4 600 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 E7ENQ6 273 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 GDF11O95390 407 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 GHRP10912 638 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 MARCH10Q8NA82 808 aaPredicted RBP18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP6NLQ92738 828 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 ADAM33Q9BZ11 813 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 FAM129AQ9BZQ8 928 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 ASCC2Q9H1I8 757 aaPredicted RBP18.48■□□□□ 0.55
SPAST-202ENST00000345662 NDUFA13Q9P0J0 144 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 NOD1Q9Y239 953 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 PPME1Q9Y570 386 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L15C9J2P7 530 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L13C9JLJ4 530 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L11C9JVI0 530 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L18D6R9N7 530 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L22D6RA61 530 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L17D6RBQ6 530 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L19D6RCP7 530 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L20D6RJB6 530 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 DEAF1O75398 565 aaPredicted RBP18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L24Q0WX57 530 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 USP17L6PQ6QN14 398 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 SNX25Q9H3E2 840 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 RHBDL2Q9NX52 303 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 INPP5FQ9Y2H2 1132 aa18.48■□□□□ 0.55
SPAST-202ENST00000345662 KRT4P19013 534 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 LAMB3Q13751 1172 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 RCN1Q15293 331 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 SKA2Q8WVK7 121 aaPredicted RBP18.47■□□□□ 0.55
SPAST-202ENST00000345662 SCG3Q8WXD2 468 aaKnown RBP18.47■□□□□ 0.55
SPAST-202ENST00000345662 ANKRD27Q96NW4 1050 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 PNPLA7Q6ZV29 1317 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 LOC102724428A0A0B4J2F2 783 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 O00370 1275 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 TMEM253P0C7T8 217 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 GNA15P30679 374 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 SIK1P57059 783 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 ANTXR2P58335 489 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 STX3Q13277 289 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 ERFEQ4G0M1 354 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 CEP55Q53EZ4 464 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 LRRC8EQ6NSJ5 796 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 CYFIP1Q7L576 1253 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 NCLNQ969V3 563 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 ZBTB18Q99592 522 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 NEO1Q92859 1461 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 KLHL2O95198 593 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 APOA1P02647 267 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 PAMP19021 973 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 TBXAS1P24557 533 aaPredicted RBP18.47■□□□□ 0.55
SPAST-202ENST00000345662 SERPINB10P48595 397 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 TRPC1P48995 793 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 PBXIP1Q96AQ6 731 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 EME1Q96AY2 570 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 LRRC4Q9HBW1 653 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 BSDC1Q9NW68 430 aaPredicted RBP18.47■□□□□ 0.55
SPAST-202ENST00000345662 KLHL8Q9P2G9 620 aaPredicted RBP18.47■□□□□ 0.55
SPAST-202ENST00000345662 SATB2Q9UPW6 733 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 GJA3Q9Y6H8 435 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms