RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PRKCBP05771 671 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 CTSAP10619 480 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 SYT1P21579 422 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 AKAP5P24588 427 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 SCNN1GP51170 649 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 RESTQ13127 1097 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 SF3A1Q15459 793 aaKnown RBP15.93■□□□□ 0.14
HMGN3-202ENST00000344726 TMEM31Q5JXX7 168 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 COLGALT2Q8IYK4 626 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 DEPTORQ8TB45 409 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 LRRC15Q8TF66 581 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 KIFAP3Q92845 792 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 INTS4Q96HW7 963 aaKnown RBP15.93■□□□□ 0.14
HMGN3-202ENST00000344726 CITO14578 2027 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.92■□□□□ 0.14
HMGN3-202ENST00000344726 LOC730098B7Z3J9 87 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 ACKR2O00590 384 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 CXCL14O95715 111 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 EFEMP2O95967 443 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 LIG1P18858 919 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 PDCP20941 246 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 DSC1Q08554 894 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 PRPF4BQ13523 1007 aaKnown RBP15.92■□□□□ 0.14
HMGN3-202ENST00000344726 PPP2R5AQ15172 486 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 PTPN14Q15678 1187 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 MAPK6Q16659 721 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 TMEM119Q4V9L6 283 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 NT5DC1Q5TFE4 455 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 EEF1DP3Q658K8 133 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 KANK3Q6NY19 840 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 FAM173BQ6P4H8 233 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 RNF135Q8IUD6 432 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 IFT74Q96LB3 600 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 TMEM175Q9BSA9 504 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 TRIM6Q9C030 488 aaPredicted RBP15.92■□□□□ 0.14
HMGN3-202ENST00000344726 CXCL16Q9H2A7 254 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 UBN1Q9NPG3 1134 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 KANSL3Q9P2N6 904 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 MUTYHQ9UIF7 546 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 IRAK3Q9Y616 596 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 CLIC4Q9Y696 253 aa15.92■□□□□ 0.14
HMGN3-202ENST00000344726 FSD2A1L4K1 749 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 DCXO43602 365 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 SSBP05455 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
HMGN3-202ENST00000344726 EPCAMP16422 314 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 CA8P35219 290 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 NPTX2P47972 431 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 SLC12A3P55017 1021 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 PEX3P56589 373 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 CBX2Q14781 532 aaPredicted RBP15.91■□□□□ 0.14
HMGN3-202ENST00000344726 TAS1R3Q7RTX0 852 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 TAS1R1Q7RTX1 841 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 CABP7Q86V35 215 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 RNF168Q8IYW5 571 aaPredicted RBP15.91■□□□□ 0.14
HMGN3-202ENST00000344726 SYT2Q8N9I0 419 aaPredicted RBP15.91■□□□□ 0.14
HMGN3-202ENST00000344726 KLK14Q9P0G3 267 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 CACNG4Q9UBN1 327 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 MTMR6Q9Y217 621 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 GIT1Q9Y2X7 761 aa15.91■□□□□ 0.14
HMGN3-202ENST00000344726 PRG3Q9Y2Y8 225 aaPredicted RBP15.91■□□□□ 0.14
HMGN3-202ENST00000344726 SFI1A8K8P3 1242 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 N4BP3O15049 544 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 LILRB3O75022 631 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 PLA2G4BP0C869 781 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 GUCY2CP25092 1073 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 RAD51AP2Q09MP3 1159 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 PTPAQ15257 358 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 SLC22A17Q8WUG5 538 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 SNX21Q969T3 373 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 AK8Q96MA6 479 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 FAM193BQ96PV7 902 aaPredicted RBP15.9■□□□□ 0.14
HMGN3-202ENST00000344726 POP1Q99575 1024 aaKnown RBP15.9■□□□□ 0.14
HMGN3-202ENST00000344726 PHF7Q9BWX1 381 aaPredicted RBP15.9■□□□□ 0.14
HMGN3-202ENST00000344726 NT5C3AQ9H0P0 336 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 SNTG2Q9NY99 539 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 PARP2Q9UGN5 583 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 FAN1Q9Y2M0 1017 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 PLXNA3P51805 1871 aa15.9■□□□□ 0.14
HMGN3-202ENST00000344726 PDCD11Q14690 1871 aaKnown RBP15.89■□□□□ 0.13
HMGN3-202ENST00000344726 NPHP3-ACAD11A0A0J9YXS1 232 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 CCDC169A6NNP5 214 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 BMP15O95972 392 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 ALDH2P05091 517 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 WEE2P0C1S8 567 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 ALADP13716 330 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 OR1G1P47890 313 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 EFNA5P52803 228 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 ARSHQ5FYA8 562 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 HERC4Q5GLZ8 1057 aaPredicted RBP15.89■□□□□ 0.13
HMGN3-202ENST00000344726 C12orf76Q8N812 135 aaPredicted RBP15.89■□□□□ 0.13
HMGN3-202ENST00000344726 RABGGTAQ92696 567 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 CASP10Q92851 521 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 CDK5RAP3Q96JB5 506 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 RPGRIP1Q96KN7 1286 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 BLOC1S4Q9NUP1 217 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 ARHGAP28Q9P2N2 729 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 VWA8A3KMH1 1905 aa15.89■□□□□ 0.13
HMGN3-202ENST00000344726 ZMYM2Q9UBW7 1377 aa15.88■□□□□ 0.13
HMGN3-202ENST00000344726 CARNS1A5YM72 827 aa15.88■□□□□ 0.13
HMGN3-202ENST00000344726 K7ERI5 159 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms