RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 K7ENM7 598 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 RFXAPO00287 272 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PPP1R37O75864 691 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PFKFB1P16118 471 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 LIG1P18858 919 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 EEF1DP3Q658K8 133 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 KCNT2Q6UVM3 1135 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MPZL3Q6UWV2 235 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CDR2LQ86X02 465 aaPredicted RBP14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CCDC65Q8IXS2 484 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CHAMP1Q96JM3 812 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ZNF558Q96NG5 402 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TMEM175Q9BSA9 504 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TARS2Q9BW92 718 aaKnown RBP14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 STK39Q9UEW8 545 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 HES2Q9Y543 173 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ITGB1P05556 798 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 IGFBP4P22692 258 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GRM5P41594 1212 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ALDH7A1P49419 539 aaKnown RBP14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MCL1Q07820 350 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 KYAT1Q16773 422 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 SPOUT1Q5T280 376 aaKnown RBP14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CEP57L1Q8IYX8 460 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 KLHL23Q8NBE8 558 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GSTCDQ8NEC7 633 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MAFAQ8NHW3 353 aaPredicted RBP14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CDT1Q9H211 546 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ZHX3Q9H4I2 956 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 PANK4Q9NVE7 773 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CHMP5Q9NZZ3 219 aa14.34□□□□□ -0.11
HLA-DQA1-201ENST00000343139 RALGAPA2Q2PPJ7 1873 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PVALEFA0A1B0GWK0 134 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CLDN3O15551 220 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ACTN4O43707 911 aaKnown RBP14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FGF18O76093 207 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 MLH1P40692 756 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 RNASELQ05823 741 aaKnown RBP14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 DSC1Q08554 894 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ZNF568Q3ZCX4 644 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 HERC4Q5GLZ8 1057 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PDE12Q6L8Q7 609 aaKnown RBP14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SPPL3Q8TCT6 385 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 MRPS27Q92552 414 aaKnown RBP14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GAD1Q99259 594 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NRDE2Q9H7Z3 1164 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 MRPL44Q9H9J2 332 aaKnown RBP14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SPG21Q9NZD8 308 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 INPP5FQ9Y2H2 1132 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 USP20Q9Y2K6 914 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PCDHB13Q9Y5F0 798 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 STYXL1Q9Y6J8 313 aa14.33□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FNDC1Q4ZHG4 1894 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 A0A1B0GVL5 298 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GRM6O15303 877 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 IDEP14735 1019 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 AKAP5P24588 427 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NMT1P30419 496 aaKnown RBP14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SYKP43405 635 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 BCAR1P56945 870 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 POU5F1Q01860 360 aaKnown RBP14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 KRT17Q04695 432 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GRIK3Q13003 919 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NOLC1Q14978 699 aaKnown RBP eCLIP14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 LONRF3Q496Y0 759 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TIGD5Q53EQ6 642 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 XKR4Q5GH76 650 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 UNC13DQ70J99 1090 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 THNSL1Q8IYQ7 743 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SLC39A11Q8N1S5 342 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TCHPQ9BT92 498 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CCDC94Q9BW85 323 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 TOPORSQ9NS56 1045 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SNTG2Q9NY99 539 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 HCSTQ9UBK5 93 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PARP2Q9UGN5 583 aa14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 PUF60Q9UHX1 559 aaKnown RBP14.32□□□□□ -0.12
HLA-DQA1-201ENST00000343139 HNRNPDLO14979 420 aaKnown RBP14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 RECQL4O94761 1208 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ALDH2P05091 517 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GALTP07902 379 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 LIG4P49917 911 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 AFF1P51825 1210 aaKnown RBP14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 NDUFA8P51970 172 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 EHHADHQ08426 723 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 COASYQ13057 564 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 CAMK1Q14012 370 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 L1TD1Q5T7N2 865 aaKnown RBP14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SLFN12LQ6IEE8 588 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ALKAL1Q6UXT8 129 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 STXBP4Q6ZWJ1 553 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 COLGALT2Q8IYK4 626 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 BICD1Q96G01 975 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 ZFP42Q96MM3 310 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 FAM193BQ96PV7 902 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 SERTAD1Q9UHV2 236 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 EXOC7Q9UPT5 735 aa14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQA1-201ENST00000343139 A0A0B4J269 797 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms