RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 KARSQ15046 597 aaKnown RBP9□□□□□ -0.97
HMGB1-203ENST00000341423 FYB2Q5VWT5 728 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 LPCAT2Q7L5N7 544 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 WDR18Q9BV38 432 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 OLA1Q9NTK5 396 aaKnown RBP9□□□□□ -0.97
HMGB1-203ENST00000341423 RGL1Q9NZL6 768 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 TRAK2O60296 914 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 TMTC4Q5T4D3 741 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 RINT1Q6NUQ1 792 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 KLHL35Q6PF15 583 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 CATSPERGQ6ZRH7 1159 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 PGBD1Q96JS3 809 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 SPATA16Q9BXB7 569 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 ARHGAP39Q9C0H5 1083 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 FAM217BQ9NTX9 383 aaPredicted RBP9□□□□□ -0.97
HMGB1-203ENST00000341423 SLC13A4Q9UKG4 626 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 CA14Q9ULX7 337 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 COL5A2P05997 1499 aaPredicted RBP9□□□□□ -0.97
HMGB1-203ENST00000341423 PDZK1P1A8MUH7 402 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 HMGB1P1B2RPK0 211 aaPredicted RBP9□□□□□ -0.97
HMGB1-203ENST00000341423 USP2O75604 605 aaPredicted RBP9□□□□□ -0.97
HMGB1-203ENST00000341423 KRT15P19012 456 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 CD58P19256 250 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 SP2Q02086 613 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 CTTNQ14247 550 aaKnown RBP9□□□□□ -0.97
HMGB1-203ENST00000341423 TMED2Q15363 201 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 EOGTQ5NDL2 527 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 RABGAP1LQ5R372 815 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 FAM43AQ8N2R8 423 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 VPS37BQ9H9H4 285 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 ANO10Q9NW15 660 aa9□□□□□ -0.97
HMGB1-203ENST00000341423 RGS17Q9UGC6 210 aaPredicted RBP9□□□□□ -0.97
HMGB1-203ENST00000341423 AXLP30530 894 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 ETFBP38117 255 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 ATP1A2P50993 1020 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 PSMC6P62333 389 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 MTFR1Q15390 333 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 ERAP2Q6P179 960 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 LRRC71Q8N4P6 559 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 ACER1Q8TDN7 264 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 FBXO28Q9NVF7 368 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 SOHLH2Q9NX45 425 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 SNX9Q9Y5X1 595 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 CYP2D7A0A087X1C5 515 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 PRKAB2O43741 272 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 ATP6V1E2Q96A05 226 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 CDCA3Q99618 268 aaPredicted RBP8.99□□□□□ -0.97
HMGB1-203ENST00000341423 METTL14Q9HCE5 456 aaKnown RBP8.99□□□□□ -0.97
HMGB1-203ENST00000341423 RASSF9O75901 435 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 ADORA2BP29275 332 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 ZNF75DP51815 510 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 IFT81Q8WYA0 676 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.99□□□□□ -0.976e-8■□□□□ 10.3
HMGB1-203ENST00000341423 SELENOOQ9BVL4 669 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 SIK2Q9H0K1 926 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 TMX2Q9Y320 296 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 HBS1LQ9Y450 684 aaKnown RBP8.99□□□□□ -0.97
HMGB1-203ENST00000341423 CTAGE5O15320 804 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 CYP2D6P10635 497 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 SLC2A3P11169 496 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 XRCC5P13010 732 aaKnown RBP8.99□□□□□ -0.97
HMGB1-203ENST00000341423 GEMIN4P57678 1058 aaKnown RBP8.99□□□□□ -0.97
HMGB1-203ENST00000341423 NWD1Q149M9 1564 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 CCDC184Q52MB2 194 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 ESRP1Q6NXG1 681 aaKnown RBP8.99□□□□□ -0.97
HMGB1-203ENST00000341423 ARMCX6Q7L4S7 300 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 LEMD2Q8NC56 503 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 MCOLN3Q8TDD5 553 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 TBC1D14Q9P2M4 693 aa8.99□□□□□ -0.97
HMGB1-203ENST00000341423 FAM95CA0A1B0GW59 222 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 PER2O15055 1255 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 GDI1P31150 447 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 GNL1P36915 607 aaPredicted RBP8.98□□□□□ -0.97
HMGB1-203ENST00000341423 ANKS6Q68DC2 871 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 FAM124AQ86V42 546 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 TBCKQ8TEA7 893 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 TRIM54Q9BYV2 358 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 RP1L1Q8IWN7 2480 aaPredicted RBP8.98□□□□□ -0.97
HMGB1-203ENST00000341423 AOX1Q06278 1338 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 THAP12O43422 761 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 CREB3L3Q68CJ9 461 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 CEP85Q6P2H3 762 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 PADI6Q6TGC4 694 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 NPAS4Q8IUM7 802 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 ADAMTS19Q8TE59 1207 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 PLCD4Q9BRC7 762 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 OSGEPL1Q9H4B0 414 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 NEUROD4Q9HD90 331 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 ZNF212Q9UDV6 495 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 PEX12O00623 359 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 DNAJC6O75061 913 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 ESRRBO95718 433 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 ASS1P00966 412 aaKnown RBP8.98□□□□□ -0.97
HMGB1-203ENST00000341423 CSH1P0DML2 217 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 CSH2P0DML3 217 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 AP3M2P53677 418 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 NFIAQ12857 509 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 LRRC41Q15345 812 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 ARHGAP44Q17R89 818 aa8.98□□□□□ -0.97
HMGB1-203ENST00000341423 HSP90B2PQ58FF3 399 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms