RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 ARP10275 920 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 BMP3P12645 472 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 YBX3P16989 372 aaKnown RBP eCLIP16.4■□□□□ 0.22
PERM1-201ENST00000341290 PTGIRP43119 386 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 EIF3BP55884 814 aaKnown RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 PPP3CAQ08209 521 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 LONRF1Q17RB8 773 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 STRIP1Q5VSL9 837 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 NYAP2Q9P242 653 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 PI4KBQ9UBF8 816 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 BAIAP2L1Q9UHR4 511 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 GGA2Q9UJY4 613 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 PRR12Q9ULL5 1215 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 TTC7AQ9ULT0 858 aaPredicted RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 TMEM150BA6NC51 233 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 K7ENM7 598 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 FZD9O00144 591 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 HIP1RO75146 1068 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 PNMA8AQ86V59 439 aaPredicted RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 ATXN2LQ8WWM7 1075 aaKnown RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 FAM84AQ96KN4 292 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 ZNF317Q96PQ6 595 aaPredicted RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 NAP1L3Q99457 506 aaPredicted RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 CBWD1Q9BRT8 395 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 FOSP01100 380 aaPredicted RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 CLTAP09496 248 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 ANXA13P27216 316 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 TBC1D1Q86TI0 1168 aaPredicted RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 C1orf54Q8WWF1 131 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 MKL1Q969V6 931 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 CNOT10Q9H9A5 744 aaKnown RBP16.4■□□□□ 0.22
PERM1-201ENST00000341290 RASAL2Q9UJF2 1139 aa16.4■□□□□ 0.22
PERM1-201ENST00000341290 SRRM3A6NNA2 597 aaPredicted RBP16.39■□□□□ 0.21
PERM1-201ENST00000341290 CCDC169A6NNP5 214 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 SPOPO43791 374 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 PHF2O75151 1096 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 DLATP10515 647 aaKnown RBP16.39■□□□□ 0.21
PERM1-201ENST00000341290 PEX19P40855 299 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 PLCB4Q15147 1175 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 UBL4BQ8N7F7 174 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 UNC45AQ9H3U1 944 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 CTNNAL1Q9UBT7 734 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 FRMPD4Q14CM0 1322 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 CCT8L1PA6NM43 557 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 EIF3DO15371 548 aaKnown RBP eCLIP16.39■□□□□ 0.21
PERM1-201ENST00000341290 ECE2O60344 883 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 VPS41P49754 854 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 DRP2Q13474 957 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 SLC47A2Q86VL8 602 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 PWWP2AQ96N64 755 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 ZSWIM1Q9BR11 485 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 LXNQ9BS40 222 aa16.39■□□□□ 0.21
PERM1-201ENST00000341290 TDRD3Q9H7E2 651 aaKnown RBP16.39■□□□□ 0.21
PERM1-201ENST00000341290 YDJCA8MPS7 323 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 CYP26A1O43174 497 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 MMP13P45452 471 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 DACT2Q5SW24 774 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 PPM1KQ8N3J5 372 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 ANKRD42Q8N9B4 389 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 LMO3Q8TAP4 145 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 GMLQ99445 158 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 FAM118BQ9BPY3 351 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 ZNF577Q9BSK1 485 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 ABCF3Q9NUQ8 709 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 TRPC6Q9Y210 931 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 RASGRF2O14827 1237 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 PSMD10O75832 226 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 VIL1P09327 827 aaKnown RBP16.38■□□□□ 0.21
PERM1-201ENST00000341290 CALRP27797 417 aaKnown RBP16.38■□□□□ 0.21
PERM1-201ENST00000341290 CIITAP33076 1130 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 DHX34Q14147 1143 aaKnown RBP16.38■□□□□ 0.21
PERM1-201ENST00000341290 C2CD6Q53TS8 623 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 DAB2IPQ5VWQ8 1189 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 HHIPL2Q6UWX4 724 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 CCDC127Q96BQ5 260 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 ZNRF3Q9ULT6 936 aa16.38■□□□□ 0.21
PERM1-201ENST00000341290 ARHGEF35A5YM69 484 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 FAM187AA6NFU0 413 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 NUDT17P0C025 328 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 RARAP10276 462 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 BCRP11274 1271 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 GPC5P78333 572 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 AOC3Q16853 763 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 EPC2Q52LR7 807 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 SEL1L2Q5TEA6 688 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 SEPT14Q6ZU15 432 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 NOP9Q86U38 636 aaKnown RBP16.37■□□□□ 0.21
PERM1-201ENST00000341290 FMNL3Q8IVF7 1028 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 ANKS4BQ8N8V4 417 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 GDAP1Q8TB36 358 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 ACER1Q8TDN7 264 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 ATG4AQ8WYN0 398 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 SAMD15Q9P1V8 674 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 CLDN3O15551 220 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 RIPK2O43353 540 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 KIF22Q14807 665 aa16.37■□□□□ 0.21
PERM1-201ENST00000341290 TMEM179Q6ZVK1 233 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms