RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 K7ERI5 159 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 HIP1RO75146 1068 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 NPTXRO95502 500 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 GTF2F1P35269 517 aaKnown RBP eCLIP14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 MLH1P40692 756 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 SLC11A1P49279 550 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 DSC1Q08554 894 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 GRIK3Q13003 919 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 SF3A1Q15459 793 aaKnown RBP14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 ZRSR1Q15695 479 aaKnown RBP14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 SMAD2Q15796 467 aaKnown RBP14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 RBM23Q86U06 439 aaKnown RBP14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 ZNF280BQ86YH2 543 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 VPS52Q8N1B4 723 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 SMRP1Q8NCR6 262 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 PNMA5Q96PV4 448 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 GAD1Q99259 594 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 POP1Q99575 1024 aaKnown RBP14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 NTPCRQ9BSD7 190 aaKnown RBP14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 GBP3Q9H0R5 595 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 ZBP1Q9H171 429 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 ZSCAN16Q9H4T2 348 aaPredicted RBP14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 PDZD7Q9H5P4 517 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 ARHGAP28Q9P2N2 729 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 DNAJB4Q9UDY4 337 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 SSX2IPQ9Y2D8 614 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 FAN1Q9Y2M0 1017 aa14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 MORC2Q9Y6X9 1032 aaPredicted RBP14.69□□□□□ -0.06
SIRPB3P-201ENST00000340424 C2orf71A6NGG8 1288 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 CCDC169A6NNP5 214 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 NT5C1B-RDH14C9J2C7 533 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 H0YCG3 227 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 LINC01565O15544 149 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 MBTPS2O43462 519 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 GABBR2O75899 941 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 DDHD2O94830 711 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 GLP2RO95838 553 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 POMCP01189 267 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 PLA2G4BP0C869 781 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 CTSAP10619 480 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 IL9P15248 144 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 HOXB8P17481 243 aaPredicted RBP14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 NPTX2P47972 431 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 PEX3P56589 373 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 DLX2Q07687 328 aaPredicted RBP14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 KCNK18Q7Z418 384 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 TMEM173Q86WV6 379 aaPredicted RBP14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 HSCBQ8IWL3 235 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 COLGALT2Q8IYK4 626 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 DAW1Q8N136 415 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 TMEM87AQ8NBN3 555 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 SPIRE2Q8WWL2 714 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 CASP10Q92851 521 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 NECAB3Q96P71 396 aaPredicted RBP14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 RPS6KC1Q96S38 1066 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 RUSC1Q9BVN2 902 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 APOL6Q9BWW8 343 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 KMT5AQ9NQR1 393 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 CLEC1BQ9P126 229 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 HES2Q9Y543 173 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 PCDHGC5Q9Y5F6 944 aa14.68□□□□□ -0.06
SIRPB3P-201ENST00000340424 HIDE1A8MVS5 230 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 NRP1O14786 923 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 PER2O15055 1255 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 STX6O43752 255 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 CXCL14O95715 111 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 SCNN1GP51170 649 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 AFF1P51825 1210 aaKnown RBP14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 SMTNP53814 917 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 SLC12A3P55017 1021 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 RESTQ13127 1097 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 MAPK7Q13164 816 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 KCNC3Q14003 757 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 ATF7IP2Q5U623 682 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 PPFIBP1Q86W92 1011 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 ADHFE1Q8IWW8 467 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 RASSF8Q8NHQ8 419 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 KCNN1Q92952 543 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 ZFP42Q96MM3 310 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 KIFC3Q9BVG8 833 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 MRPL4Q9BYD3 311 aaKnown RBP14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 LARSQ9P2J5 1176 aaKnown RBP14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 PARP2Q9UGN5 583 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 ODF2LQ9ULJ1 636 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 TNFSF13BQ9Y275 285 aa14.67□□□□□ -0.06
SIRPB3P-201ENST00000340424 TDRD15B5MCY1 1934 aaKnown RBP14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 B4GALT3O60512 393 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 SOD2P04179 222 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 SSBP05455 408 aaKnown RBP eCLIP14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 PLS3P13797 630 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 LIG1P18858 919 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 AKAP5P24588 427 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 ABCD1P33897 745 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 TXLNAP40222 546 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 OR1G1P47890 313 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 ZP2Q05996 745 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 CDR2LQ86X02 465 aaPredicted RBP14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 GPR65Q8IYL9 337 aa14.66□□□□□ -0.06
SIRPB3P-201ENST00000340424 GJD3Q8N144 294 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms