RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 ZNF233A6NK53 670 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 PGRMC1O00264 195 aaKnown RBP18■□□□□ 0.47
TMEM39B-201ENST00000336294 CXCL11O14625 94 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 IRF6O14896 467 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 KIAA0391O15091 583 aaKnown RBP18■□□□□ 0.47
TMEM39B-201ENST00000336294 BUB1BO60566 1050 aaPredicted RBP18■□□□□ 0.47
TMEM39B-201ENST00000336294 ZBTB48P10074 688 aaPredicted RBP18■□□□□ 0.47
TMEM39B-201ENST00000336294 RFC5P40937 340 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 NAMPTP43490 491 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 NEDD9Q14511 834 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 FAM160B1Q5W0V3 765 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 PALB2Q86YC2 1186 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 SLC7A3Q8WY07 619 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 SHC3Q92529 594 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 ARHGEF26Q96DR7 871 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 KRT12Q99456 494 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 POP1Q99575 1024 aaKnown RBP18■□□□□ 0.47
TMEM39B-201ENST00000336294 FAM213AQ9BRX8 229 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 ISCUQ9H1K1 167 aa18■□□□□ 0.47
TMEM39B-201ENST00000336294 TOPORSQ9NS56 1045 aaPredicted RBP18■□□□□ 0.47
TMEM39B-201ENST00000336294 EXTL3O43909 919 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 FARP2O94887 1054 aaPredicted RBP17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 NF2P35240 595 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 HADHBP55084 474 aaKnown RBP17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 RNASE9P60153 205 aaKnown RBP17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 MRPS25P82663 173 aaKnown RBP17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 EMBQ6PCB8 327 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 ANKRD13AQ8IZ07 590 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 DEPTORQ8TB45 409 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 HELQQ8TDG4 1101 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 TAS1R2Q8TE23 839 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 EPS8L1Q8TE68 723 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 TMEM143Q96AN5 459 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 MPHOSPH6Q99547 160 aaKnown RBP17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.478e-8■■■□□ 15.1
TMEM39B-201ENST00000336294 PAGR1Q9BTK6 254 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 GDF3Q9NR23 364 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 NRBP2Q9NSY0 501 aa17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 NOCTQ9UK39 431 aaKnown RBP17.99■□□□□ 0.47
TMEM39B-201ENST00000336294 GSTTP1A0A1W2PQM5 241 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 ZC3H11AO75152 810 aaKnown RBP eCLIP17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 RTN2O75298 545 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 HEXIM1O94992 359 aaKnown RBP17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 SGPL1O95470 568 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 SLC25A27O95847 323 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 FTLP02792 175 aaPredicted RBP17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 DLATP10515 647 aaKnown RBP17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 TGFB3P10600 412 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 ARL2P36404 184 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 TCEAL1Q15170 157 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 PTPROQ16827 1216 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 SV2AQ7L0J3 742 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 RASGEF1CQ8N431 466 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 ASAP3Q8TDY4 903 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 SCFD2Q8WU76 684 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 FAM81BQ96LP2 452 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 HINFPQ9BQA5 517 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 ASCC2Q9H1I8 757 aaPredicted RBP17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 DIS3Q9Y2L1 958 aaKnown RBP17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 STYXL1Q9Y6J8 313 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 SPDYE5A6NIY4 337 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 CYP26A1O43174 497 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 PIGRP01833 764 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 GZMAP12544 262 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 GLRA2P23416 452 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 COPB2P35606 906 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 SND1Q7KZF4 910 aaKnown RBP eCLIP17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 ENOSF1Q7L5Y1 443 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 NOP9Q86U38 636 aaKnown RBP17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 GDAP1L1Q96MZ0 367 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 CEP89Q96ST8 783 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.98■□□□□ 0.472e-9■■■■■ 223.6
TMEM39B-201ENST00000336294 AGTPBP1Q9UPW5 1226 aa17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 NOC2LQ9Y3T9 749 aaKnown RBP17.98■□□□□ 0.47
TMEM39B-201ENST00000336294 LRRIQ4A6NIV6 560 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 CCDC188H7C350 402 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 CNMDO75829 334 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 GLI1P08151 1106 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 CHRNB2P17787 502 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 GPC5P78333 572 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 NNTQ13423 1086 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 PRPF4BQ13523 1007 aaKnown RBP17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 PSMD6Q15008 389 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 SLFN12LQ6IEE8 588 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 AFAP1L1Q8TED9 768 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 CAVIN3Q969G5 261 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 PCYT2Q99447 389 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 CWC15Q9P013 229 aaKnown RBP17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 VPS18Q9P253 973 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 SIP14410 1827 aa17.97■□□□□ 0.47
TMEM39B-201ENST00000336294 K7ERI5 159 aa17.96■□□□□ 0.47
TMEM39B-201ENST00000336294 PDE6CP51160 858 aa17.96■□□□□ 0.47
TMEM39B-201ENST00000336294 STAT5BP51692 787 aa17.96■□□□□ 0.47
TMEM39B-201ENST00000336294 GUCY2DQ02846 1103 aa17.96■□□□□ 0.47
TMEM39B-201ENST00000336294 PAK2Q13177 524 aa17.96■□□□□ 0.47
TMEM39B-201ENST00000336294 METTL7BQ6UX53 244 aa17.96■□□□□ 0.47
TMEM39B-201ENST00000336294 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.96■□□□□ 0.47
TMEM39B-201ENST00000336294 SLC47A2Q86VL8 602 aa17.96■□□□□ 0.47
TMEM39B-201ENST00000336294 KLHL7Q8IXQ5 586 aa17.96■□□□□ 0.47
TMEM39B-201ENST00000336294 PSPC1Q8WXF1 523 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms