RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 TGFB1I1O43294 461 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 FAM189A1O60320 539 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 GJB5O95377 273 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 EOMESO95936 686 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 STAG3L1P0CL83 205 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 ADSSP30520 456 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 NOLC1Q14978 699 aaKnown RBP eCLIP17.56■□□□□ 0.4
LRRC28-202ENST00000331450 FAM109BQ6ICB4 259 aaPredicted RBP17.56■□□□□ 0.4
LRRC28-202ENST00000331450 HERC6Q8IVU3 1022 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 SMYD4Q8IYR2 804 aaPredicted RBP17.56■□□□□ 0.4
LRRC28-202ENST00000331450 KCTD10Q9H3F6 313 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
LRRC28-202ENST00000331450 ANKFY1Q9P2R3 1169 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 CLDN3O15551 220 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 DGKIO75912 1065 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 GRM5P41594 1212 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 HTRA4P83105 476 aaPredicted RBP17.55■□□□□ 0.4
LRRC28-202ENST00000331450 KNOP1Q1ED39 458 aaKnown RBP17.55■□□□□ 0.4
LRRC28-202ENST00000331450 CCDC183Q5T5S1 534 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 AGMOQ6ZNB7 445 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 APBB1IPQ7Z5R6 666 aaPredicted RBP17.55■□□□□ 0.4
LRRC28-202ENST00000331450 NELFCDQ8IXH7 590 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 SYCP3Q8IZU3 236 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 CEP120Q8N960 986 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 ZNF689Q96CS4 500 aaPredicted RBP17.55■□□□□ 0.4
LRRC28-202ENST00000331450 TRIM6Q9C030 488 aaPredicted RBP17.55■□□□□ 0.4
LRRC28-202ENST00000331450 GBP3Q9H0R5 595 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 HES2Q9Y543 173 aa17.55■□□□□ 0.4
LRRC28-202ENST00000331450 BIN1O00499 593 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 KIF20AO95235 890 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 GARTP22102 1010 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 PRCPP42785 496 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 SNRPFP62306 86 aaKnown RBP17.54■□□□□ 0.4
LRRC28-202ENST00000331450 NFKBIBQ15653 356 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 ZCWPW2Q504Y3 356 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 CLLU1OSQ5K130 101 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 ISM2Q6H9L7 571 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 SLFN12LQ6IEE8 588 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 ZBTB33Q86T24 672 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 LPPQ93052 612 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 PGBD4Q96DM1 585 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 TCHPQ9BT92 498 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 AGPAT3Q9NRZ7 376 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 TYW1Q9NV66 732 aaKnown RBP17.54■□□□□ 0.4
LRRC28-202ENST00000331450 LRFN2Q9ULH4 789 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 MAPK8IP1Q9UQF2 711 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 PCDHB7Q9Y5E2 793 aa17.54■□□□□ 0.4
LRRC28-202ENST00000331450 GRXCR1A8MXD5 290 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 OGTO15294 1046 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 INPPL1O15357 1258 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 UPP2O95045 317 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 FGFR1P11362 822 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 CD44P16070 742 aaKnown RBP17.53■□□□□ 0.4
LRRC28-202ENST00000331450 C12orf56Q8IXR9 622 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 TMEM192Q8IY95 271 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 ADSSL1Q8N142 457 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 SP7Q8TDD2 431 aaPredicted RBP17.53■□□□□ 0.4
LRRC28-202ENST00000331450 CBWD1Q9BRT8 395 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 MSTO1Q9BUK6 570 aa17.53■□□□□ 0.4
LRRC28-202ENST00000331450 CGNQ9P2M7 1197 aaKnown RBP17.53■□□□□ 0.4
LRRC28-202ENST00000331450 RANBP2P49792 3224 aaKnown RBP17.53■□□□□ 0.4
LRRC28-202ENST00000331450 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.52■□□□□ 0.4
LRRC28-202ENST00000331450 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.52■□□□□ 0.4
LRRC28-202ENST00000331450 PDXKO00764 312 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 MEFVO15553 781 aaPredicted RBP17.52■□□□□ 0.4
LRRC28-202ENST00000331450 HOXA2O43364 376 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 RECQL4O94761 1208 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 HARSP12081 509 aaKnown RBP17.52■□□□□ 0.4
LRRC28-202ENST00000331450 ITGA4P13612 1032 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 GATMP50440 423 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 LRIT3Q3SXY7 679 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 ZBTB41Q5SVQ8 909 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 CAVIN1Q6NZI2 390 aaKnown RBP17.52■□□□□ 0.4
LRRC28-202ENST00000331450 FAM117BQ6P1L5 589 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 ARMCX5Q6P1M9 558 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 HS2ST1Q7LGA3 356 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 HACE1Q8IYU2 909 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 RNF169Q8NCN4 708 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 TMEM174Q8WUU8 243 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 RSPH1Q8WYR4 309 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 POMGNT1Q8WZA1 660 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 RSAD1Q9HA92 442 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 SNTG2Q9NY99 539 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 TRAF3IP3Q9Y228 551 aa17.52■□□□□ 0.4
LRRC28-202ENST00000331450 PPP1R3GB7ZBB8 358 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 KIAA0391O15091 583 aaKnown RBP17.51■□□□□ 0.39
LRRC28-202ENST00000331450 IBSPP21815 317 aaPredicted RBP17.51■□□□□ 0.39
LRRC28-202ENST00000331450 AKAP5P24588 427 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 PPP1R2P41236 205 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 MATR3P43243 847 aaKnown RBP eCLIP17.51■□□□□ 0.39
LRRC28-202ENST00000331450 KYAT1Q16773 422 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 SEZ6Q53EL9 994 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 CENPPQ6IPU0 288 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 CRELD2Q6UXH1 353 aaPredicted RBP17.51■□□□□ 0.39
LRRC28-202ENST00000331450 THNSL1Q8IYQ7 743 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 ZSWIM2Q8NEG5 633 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 GOLGA5Q8TBA6 731 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 HELQQ8TDG4 1101 aa17.51■□□□□ 0.39
LRRC28-202ENST00000331450 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms