RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ARMCX3Q9UH62 379 aaPredicted RBP16.67■□□□□ 0.26
PRPF3-201ENST00000324862 FRMD4BQ9Y2L6 1034 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 A0A1B0GTH6 734 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 LRRC10BA6NIK2 292 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 M0QZ92 97 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 CD4P01730 458 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 EPB41P11171 864 aaKnown RBP16.66■□□□□ 0.26
PRPF3-201ENST00000324862 TLE2Q04725 743 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 TCERG1LQ5VWI1 586 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 TRIM59Q8IWR1 403 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 CCDC127Q96BQ5 260 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 PIN4Q9Y237 131 aaKnown RBP16.66■□□□□ 0.26
PRPF3-201ENST00000324862 TNFSF13BQ9Y275 285 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 ATP11BQ9Y2G3 1177 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 HES2Q9Y543 173 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 A0A1B0GUA9 196 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 FGFR1OPO95684 399 aaKnown RBP16.66■□□□□ 0.26
PRPF3-201ENST00000324862 GARTP22102 1010 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 CD52P31358 61 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 NR1I3Q14994 352 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 LRRC26Q2I0M4 334 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 LMBRD2Q68DH5 695 aaPredicted RBP16.66■□□□□ 0.26
PRPF3-201ENST00000324862 MPZL3Q6UWV2 235 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 RPAINQ86UA6 219 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 FAM114A1Q8IWE2 563 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 GPD1LQ8N335 351 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 TMEM130Q8N3G9 435 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 CXCL16Q9H2A7 254 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 TOPORSQ9NS56 1045 aaPredicted RBP16.66■□□□□ 0.26
PRPF3-201ENST00000324862 RNF19AQ9NV58 838 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 ST3GAL5Q9UNP4 418 aa16.66■□□□□ 0.26
PRPF3-201ENST00000324862 RPS6KA5O75582 802 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 ABCD1P33897 745 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 KLK7P49862 253 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 CDC42EP1Q00587 391 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 MCL1Q07820 350 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 FAAP100Q0VG06 881 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 NOLC1Q14978 699 aaKnown RBP eCLIP16.65■□□□□ 0.26
PRPF3-201ENST00000324862 PRIMPOLQ96LW4 560 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 FBXL18Q96ME1 805 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 RTN4Q9NQC3 1192 aaKnown RBP16.65■□□□□ 0.26
PRPF3-201ENST00000324862 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
PRPF3-201ENST00000324862 SFPQP23246 707 aaKnown RBP eCLIP16.65■□□□□ 0.26
PRPF3-201ENST00000324862 MARSP56192 900 aaKnown RBP16.65■□□□□ 0.26
PRPF3-201ENST00000324862 SPAG1Q07617 926 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 LPIN1Q14693 890 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 FBXO47Q5MNV8 452 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 C1orf220Q5T0J3 134 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 SLC35C1Q96A29 364 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 PPP1R12CQ9BZL4 782 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 AGPAT5Q9NUQ2 364 aa16.65■□□□□ 0.26
PRPF3-201ENST00000324862 CGNQ9P2M7 1197 aaKnown RBP16.65■□□□□ 0.26
PRPF3-201ENST00000324862 SLC16A3O15427 465 aaKnown RBP16.64■□□□□ 0.25
PRPF3-201ENST00000324862 LRRN2O75325 713 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 IBSPP21815 317 aaPredicted RBP16.64■□□□□ 0.25
PRPF3-201ENST00000324862 SNRPFP62306 86 aaKnown RBP16.64■□□□□ 0.25
PRPF3-201ENST00000324862 APBA1Q02410 837 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 UBXN1Q04323 297 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 VWA3BQ502W6 1294 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 SCARA3Q6AZY7 606 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 SLFN12LQ6IEE8 588 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 FRMD5Q7Z6J6 570 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 NDST4Q9H3R1 872 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 C11orf49Q9H6J7 331 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.64■□□□□ 0.25
PRPF3-201ENST00000324862 EXTL3O43909 919 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 NPTXRO95502 500 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 DLATP10515 647 aaKnown RBP16.64■□□□□ 0.25
PRPF3-201ENST00000324862 SCP2P22307 547 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 KCNH2Q12809 1159 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 MAN2A1Q16706 1144 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 ANKRD20A12PQ8NF67 263 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 TMEM174Q8WUU8 243 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 ELMO3Q96BJ8 720 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 FAM212AQ96EL1 285 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 SCLYQ96I15 445 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 CRACR2AQ9BSW2 395 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 PDE11AQ9HCR9 933 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 PADI3Q9ULW8 664 aa16.64■□□□□ 0.25
PRPF3-201ENST00000324862 GNA14O95837 355 aa16.63■□□□□ 0.25
PRPF3-201ENST00000324862 DEKP35659 375 aaKnown RBP16.63■□□□□ 0.25
PRPF3-201ENST00000324862 BFSP1Q12934 665 aa16.63■□□□□ 0.25
PRPF3-201ENST00000324862 MYBPC2Q14324 1141 aa16.63■□□□□ 0.25
PRPF3-201ENST00000324862 GPNMBQ14956 572 aa16.63■□□□□ 0.25
PRPF3-201ENST00000324862 CBWD6Q4V339 395 aa16.63■□□□□ 0.25
PRPF3-201ENST00000324862 CBWD3Q5JTY5 395 aa16.63■□□□□ 0.25
PRPF3-201ENST00000324862 CBWD5Q5RIA9 395 aa16.63■□□□□ 0.25
PRPF3-201ENST00000324862 MKNK1Q9BUB5 465 aa16.63■□□□□ 0.25
PRPF3-201ENST00000324862 PTPRJQ12913 1337 aa16.63■□□□□ 0.25
PRPF3-201ENST00000324862 LGALS16A8MUM7 142 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 MGEA5O60502 916 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 CCL23P55773 120 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 CYP24A1Q07973 514 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 PPP3CAQ08209 521 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 ANKRD33Q7Z3H0 272 aa16.62■□□□□ 0.25
PRPF3-201ENST00000324862 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
PRPF3-201ENST00000324862 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.62■□□□□ 0.256e-8■■■■■ 55.9
PRPF3-201ENST00000324862 RBAKQ9NYW8 714 aaPredicted RBP16.62■□□□□ 0.25
PRPF3-201ENST00000324862 LRRIQ3A6PVS8 624 aaPredicted RBP16.62■□□□□ 0.25
PRPF3-201ENST00000324862 OGTO15294 1046 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms