RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 USP11P51784 963 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 ZNF746Q6NUN9 644 aaPredicted RBP22.25■■□□□ 1.15
RNF40-201ENST00000324685 RHPN2Q8IUC4 686 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 GFM2Q969S9 779 aaKnown RBP22.25■■□□□ 1.15
RNF40-201ENST00000324685 PBXIP1Q96AQ6 731 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 GABBR1Q9UBS5 961 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 CDV3Q9UKY7 258 aaKnown RBP22.25■■□□□ 1.15
RNF40-201ENST00000324685 SMG5Q9UPR3 1016 aaKnown RBP22.25■■□□□ 1.15
RNF40-201ENST00000324685 PALLDQ8WX93 1383 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 ARSEP51690 589 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 DAB2P98082 770 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 TTLL4Q14679 1199 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 LRIG3Q6UXM1 1119 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 C1orf54Q8WWF1 131 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 CASS4Q9NQ75 786 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 SRP68Q9UHB9 627 aaKnown RBP22.25■■□□□ 1.15
RNF40-201ENST00000324685 MROH7-TTC4A0A0A0MT08 1334 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 RASSF10A6NK89 507 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 TEX33O43247 280 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 MED21Q13503 144 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 INPP5AQ14642 412 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 HIF1AQ16665 826 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 LXNQ9BS40 222 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 FAM167BQ9BTA0 163 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 CDHR2Q9BYE9 1310 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 CSPG5O95196 566 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 ACTN3Q08043 901 aaPredicted RBP22.24■■□□□ 1.15
RNF40-201ENST00000324685 STAG2Q8N3U4 1231 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 TEKT4Q8WW24 435 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 KCNA2P16389 499 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 SERPINB10P48595 397 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 ATP2C1P98194 919 aaPredicted RBP22.24■■□□□ 1.15
RNF40-201ENST00000324685 FASTKD5Q7L8L6 764 aaKnown RBP22.24■■□□□ 1.15
RNF40-201ENST00000324685 ATL2Q8NHH9 583 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 AFG1LQ8WV93 481 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 OTUB1Q96FW1 271 aaPredicted RBP22.24■■□□□ 1.15
RNF40-201ENST00000324685 ABCE1P61221 599 aaKnown RBP22.24■■□□□ 1.15
RNF40-201ENST00000324685 NME3Q13232 169 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 SWSAP1Q6NVH7 229 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 GPR101Q96P66 508 aaPredicted RBP22.24■■□□□ 1.15
RNF40-201ENST00000324685 KIF2CQ99661 725 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 KLC4Q9NSK0 619 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 RBAKQ9NYW8 714 aaPredicted RBP22.24■■□□□ 1.15
RNF40-201ENST00000324685 ARL2BPQ9Y2Y0 163 aa22.24■■□□□ 1.15
RNF40-201ENST00000324685 KIAA0391O15091 583 aaKnown RBP22.23■■□□□ 1.15
RNF40-201ENST00000324685 GLYCTKQ8IVS8 523 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 STX19Q8N4C7 294 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 TTLL6Q8N841 843 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 ASIC4Q96FT7 647 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 CEP95Q96GE4 821 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 DCP1AQ9NPI6 582 aaPredicted RBP22.23■■□□□ 1.15
RNF40-201ENST00000324685 FAM217BQ9NTX9 383 aaPredicted RBP22.23■■□□□ 1.15
RNF40-201ENST00000324685 EMSYQ7Z589 1322 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 ADORA2BP29275 332 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 KIRREL3Q8IZU9 778 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 RNPC3Q96LT9 517 aaKnown RBP22.23■■□□□ 1.15
RNF40-201ENST00000324685 NPHP4O75161 1426 aaPredicted RBP22.23■■□□□ 1.15
RNF40-201ENST00000324685 USP27XA6NNY8 438 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 CDH6P55285 790 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 PPHLN1Q8NEY8 458 aaKnown RBP22.23■■□□□ 1.15
RNF40-201ENST00000324685 ZNF560Q96MR9 790 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 EIF2AK1Q9BQI3 630 aaKnown RBP22.23■■□□□ 1.15
RNF40-201ENST00000324685 RNF146Q9NTX7 359 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 NEMP1O14524 444 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 CDC27P30260 824 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 TAS2R42Q7RTR8 314 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 TEX2Q8IWB9 1127 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 RCOR2Q8IZ40 523 aa22.23■■□□□ 1.15
RNF40-201ENST00000324685 FARP1Q9Y4F1 1045 aaPredicted RBP22.23■■□□□ 1.15
RNF40-201ENST00000324685 APOA1P02647 267 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 PGM1P36871 562 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 FBXW4P57775 412 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 TAGAPQ8N103 731 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 SPATA4Q8NEY3 305 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 PODNQ7Z5L7 613 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 TIPINQ9BVW5 301 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 NDFIP2Q9NV92 336 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 UBA6A0AVT1 1052 aaPredicted RBP22.22■■□□□ 1.15
RNF40-201ENST00000324685 F5H423 210 aaPredicted RBP22.22■■□□□ 1.15
RNF40-201ENST00000324685 PSMD3O43242 534 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 BYSLQ13895 437 aaKnown RBP22.22■■□□□ 1.15
RNF40-201ENST00000324685 ADGRF4Q8IZF3 695 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 A8MXQ7 604 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 PDXKO00764 312 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 ZNF197O14709 1029 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 KRT72Q14CN4 511 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 TRABDQ9H4I3 376 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 TUFT1Q9NNX1 390 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 PCDHGB4Q9UN71 923 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 POLIQ9UNA4 740 aa22.22■■□□□ 1.15
RNF40-201ENST00000324685 ARAP3Q8WWN8 1544 aa22.21■■□□□ 1.15
RNF40-201ENST00000324685 EIF3EP60228 445 aaKnown RBP22.21■■□□□ 1.15
RNF40-201ENST00000324685 VIPAS39Q9H9C1 493 aa22.21■■□□□ 1.15
RNF40-201ENST00000324685 LIMA1Q9UHB6 759 aaKnown RBP22.21■■□□□ 1.15
RNF40-201ENST00000324685 AGO2Q9UKV8 859 aaKnown RBP22.21■■□□□ 1.15
RNF40-201ENST00000324685 OR6P1Q8NGX9 317 aa22.21■■□□□ 1.15
RNF40-201ENST00000324685 ASAP3Q8TDY4 903 aa22.21■■□□□ 1.15
RNF40-201ENST00000324685 ARL8AQ96BM9 186 aa22.21■■□□□ 1.15
RNF40-201ENST00000324685 SPATA17Q96L03 361 aa22.21■■□□□ 1.15
RNF40-201ENST00000324685 PITPNM2Q9BZ72 1349 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms