RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 HMX1Q9NP08 348 aaPredicted RBP9.53□□□□□ -0.88
CD28-201ENST00000324106 POLLQ9UGP5 575 aa9.53□□□□□ -0.88
CD28-201ENST00000324106 CREB3O43889 395 aa9.53□□□□□ -0.88
CD28-201ENST00000324106 SLFNL1Q499Z3 407 aa9.53□□□□□ -0.88
CD28-201ENST00000324106 MEI1Q5TIA1 1274 aa9.53□□□□□ -0.88
CD28-201ENST00000324106 ZBTB18Q99592 522 aa9.53□□□□□ -0.88
CD28-201ENST00000324106 RGL1Q9NZL6 768 aa9.53□□□□□ -0.88
CD28-201ENST00000324106 CCDC151A5D8V7 595 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 KDM1AO60341 852 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 URODP06132 367 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 TGFB3P10600 412 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 YY1P25490 414 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 PLTPP55058 493 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 PRAMEP78395 509 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 ANO4Q32M45 955 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 MGAT5BQ3V5L5 792 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 DDX53Q86TM3 631 aaKnown RBP9.52□□□□□ -0.88
CD28-201ENST00000324106 VSTM4Q8IW00 320 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 OXER1Q8TDS5 423 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 DRC3Q9H069 523 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 PCDHA13Q9Y5I0 950 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 SLC4A7Q9Y6M7 1214 aa9.52□□□□□ -0.88
CD28-201ENST00000324106 BUB1BO60566 1050 aaPredicted RBP9.52□□□□□ -0.89
CD28-201ENST00000324106 SNX2O60749 519 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 KRT38O76015 456 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 LARGE1O95461 756 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 U2AF2P26368 475 aaKnown RBP eCLIP9.52□□□□□ -0.89
CD28-201ENST00000324106 NLRP11P59045 1033 aaKnown RBP9.52□□□□□ -0.89
CD28-201ENST00000324106 PTK2BQ14289 1009 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 ELF2Q15723 593 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 PHLDB3Q6NSJ2 640 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 SH3KBP1Q96B97 665 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 DCUN1D1Q96GG9 259 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 TRIM45Q9H8W5 580 aaPredicted RBP9.52□□□□□ -0.89
CD28-201ENST00000324106 TMX2Q9Y320 296 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 QRICH2Q9H0J4 1663 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 EMSYQ7Z589 1322 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 EGFRP00533 1210 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 MUTP22033 750 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 FKBP1AP62942 108 aaKnown RBP9.52□□□□□ -0.89
CD28-201ENST00000324106 CAV1Q03135 178 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 PPATQ06203 517 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 SLC35F6Q8N357 371 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 MRPS31Q92665 395 aaKnown RBP9.52□□□□□ -0.89
CD28-201ENST00000324106 ULK4Q96C45 1275 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 C18orf8Q96DM3 657 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 PARVAQ9NVD7 372 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 FAN1Q9Y2M0 1017 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 PPME1Q9Y570 386 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 TRIM17Q9Y577 477 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 PCDHB12Q9Y5F1 795 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 SPATA31D1Q6ZQQ2 1576 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 KDM4FA0A1W2PPD8 638 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 ARHGAP42A6NI28 874 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 KIF3CO14782 793 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 AKR1A1P14550 325 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 TAF6P49848 677 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 EPHB4P54760 987 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 FKBP1BP68106 108 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 PKP1Q13835 747 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 RHOT1Q8IXI2 618 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 DNERQ8NFT8 737 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 DEPDC1BQ8WUY9 529 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 GMCL1Q96IK5 515 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 AGBL1Q96MI9 1066 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 SEPT5Q99719 369 aaPredicted RBP9.52□□□□□ -0.89
CD28-201ENST00000324106 TSSK1BQ9BXA7 367 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 NT5C1AQ9BXI3 368 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 DHX35Q9H5Z1 703 aaKnown RBP9.52□□□□□ -0.89
CD28-201ENST00000324106 JMJD4Q9H9V9 463 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 PLEKHA5Q9HAU0 1116 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 CPA4Q9UI42 421 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 HEY1Q9Y5J3 304 aa9.52□□□□□ -0.89
CD28-201ENST00000324106 E5RI56 91 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 RPA1P27694 616 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 TCF7P36402 384 aaPredicted RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 EIF2B5Q13144 721 aaKnown RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 NME3Q13232 169 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 DRAP1Q14919 205 aaPredicted RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 DEFB115Q30KQ5 88 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 TRIM67Q6ZTA4 783 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 RABGGTAQ92696 567 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 ABHD16BQ9H3Z7 469 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 MED4Q9NPJ6 270 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 KCNH7Q9NS40 1196 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 TUBE1Q9UJT0 475 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 ATP11BQ9Y2G3 1177 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 PIK3C2BO00750 1634 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 PSMD3O43242 534 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 SLC2A3P11169 496 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 ODC1P11926 461 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 HERVK_113P62684 666 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 NCOA4Q13772 614 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 TAF2Q6P1X5 1199 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 MOXD1Q6UVY6 613 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 PASD1Q8IV76 773 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 REM2Q8IYK8 340 aaPredicted RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 LRGUKQ96M69 825 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 ZMYND12Q9H0C1 365 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms