RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 PACSIN2Q9UNF0 486 aaPredicted RBP12.96□□□□□ -0.34
NCL-201ENST00000322723 EXOC7Q9UPT5 735 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 SNCAIPQ9Y6H5 919 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 PLXNB2O15031 1838 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 ADGRA2Q96PE1 1338 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 RAD51CO43502 376 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 LRRN2O75325 713 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 CYP24A1Q07973 514 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 FBXW10Q5XX13 1052 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 TEX13BQ9BXU2 312 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 CARD9Q9H257 536 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 CNTN6Q9UQ52 1028 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 BUB1BO60566 1050 aaPredicted RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 DKC1O60832 514 aaKnown RBP eCLIP12.95□□□□□ -0.341e-323■■■■■ 133.4
NCL-201ENST00000322723 RPSAP08865 295 aaKnown RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 TBC1D10BQ4KMP7 808 aaPredicted RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 SPDYCQ5MJ68 293 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 CCDC181Q5TID7 509 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 IFT20Q8IY31 132 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 ZKSCAN4Q969J2 545 aaPredicted RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 DHX33Q9H6R0 707 aaKnown RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 ACAD9Q9H845 621 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 TULP2O00295 520 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 SLC16A4O15374 487 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 DGAT1O75907 488 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 SUPT20HL2P0C7V6 817 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 ARL2P36404 184 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 GGCXP38435 758 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 SNRNP35Q16560 246 aaKnown RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 SUPT20HL1Q3ZLR7 823 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 CCDC60Q8IWA6 550 aaPredicted RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 EFCAB13Q8IY85 973 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 CPXCR1Q8N123 301 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 CHST13Q8NET6 341 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 CCDC114Q96M63 670 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 OSGEPQ9NPF4 335 aa12.95□□□□□ -0.34
NCL-201ENST00000322723 NOC2LQ9Y3T9 749 aaKnown RBP12.95□□□□□ -0.34
NCL-201ENST00000322723 H0YGN5 161 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 PEX5P50542 639 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 ERVK-9P63128 1117 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 SP2Q02086 613 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 TADA2BQ86TJ2 420 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 DNAAF5Q86Y56 855 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 RHOT2Q8IXI1 618 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 WHAMMQ8TF30 809 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 SLC20A1Q8WUM9 679 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 RPS6KC1Q96S38 1066 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.94□□□□□ -0.34
NCL-201ENST00000322723 PPME1Q9Y570 386 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 NFS1Q9Y697 457 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 PGRMC1O00264 195 aaKnown RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 KIAA0391O15091 583 aaKnown RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 RNF40O75150 1001 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 USP2O75604 605 aaPredicted RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 PSAPP07602 524 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 KRT13P13646 458 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 CTNNA2P26232 953 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 PEX3P56589 373 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 SKOR1P84550 965 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 FMO1Q01740 532 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 PRPF4BQ13523 1007 aaKnown RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 NOP9Q86U38 636 aaKnown RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 UBR7Q8N806 425 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 MCPH1Q8NEM0 835 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 PCDHA3Q9Y5H8 950 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 CNGA1P29973 690 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 SLC7A5Q01650 507 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 GCNT1Q02742 428 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 BIRC2Q13490 618 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 CUL1Q13616 776 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 E2F5Q15329 346 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 CYP1B1Q16678 543 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 GPC2Q8N158 579 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 DHX38Q92620 1227 aaKnown RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 ATP6V0A1Q93050 837 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 WRNIP1Q96S55 665 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 THAP2Q9H0W7 228 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 JPH1Q9HDC5 661 aaPredicted RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 CYP26B1Q9NR63 512 aa12.94□□□□□ -0.34
NCL-201ENST00000322723 PDCD11Q14690 1871 aaKnown RBP12.94□□□□□ -0.34
NCL-201ENST00000322723 GOLGA6CA6NDK9 693 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 FAM189A1O60320 539 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 RTN2O75298 545 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 GOLGA6DP0CG33 693 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 CARSP49589 748 aaKnown RBP12.93□□□□□ -0.34
NCL-201ENST00000322723 ANGEL2Q5VTE6 544 aaKnown RBP12.93□□□□□ -0.34
NCL-201ENST00000322723 OTUD6AQ7L8S5 288 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 CBWD2Q8IUF1 395 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 ATP8B4Q8TF62 1192 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 HAPLN2Q9GZV7 340 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 GOLGA6AQ9NYA3 693 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 SLC9A2Q9UBY0 812 aa12.93□□□□□ -0.34
NCL-201ENST00000322723 EZRP15311 586 aaKnown RBP12.93□□□□□ -0.34
NCL-201ENST00000322723 ACTR2P61160 394 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms