RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 F8W810 466 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 NRP1O14786 923 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 BMP15O95972 392 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 PLA2G4BP0C869 781 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 OR1G1P47890 313 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 EFNA5P52803 228 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 SLC12A3P55017 1021 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 DSC1Q08554 894 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 DMP1Q13316 513 aaPredicted RBP17.97■□□□□ 0.47
LSM1-201ENST00000311351 KCNC3Q14003 757 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 NT5DC1Q5TFE4 455 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 COLGALT2Q8IYK4 626 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 MRPL43Q8N983 215 aaKnown RBP17.97■□□□□ 0.47
LSM1-201ENST00000311351 SMRP1Q8NCR6 262 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 GSTCDQ8NEC7 633 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 AK8Q96MA6 479 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 DRC1Q96MC2 740 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 MTMR6Q9Y217 621 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 FAM50BQ9Y247 325 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 FAN1Q9Y2M0 1017 aa17.97■□□□□ 0.47
LSM1-201ENST00000311351 NPHP3-ACAD11A0A0J9YXS1 232 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 CARNS1A5YM72 827 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 SFI1A8K8P3 1242 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 RECQL4O94761 1208 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 CTSAP10619 480 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 GUCY2CP25092 1073 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 SSTR3P32745 418 aaPredicted RBP17.96■□□□□ 0.47
LSM1-201ENST00000311351 ZP2Q05996 745 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 COASYQ13057 564 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 KARSQ15046 597 aaKnown RBP17.96■□□□□ 0.47
LSM1-201ENST00000311351 PTPAQ15257 358 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 SMAD2Q15796 467 aaKnown RBP17.96■□□□□ 0.47
LSM1-201ENST00000311351 TAS1R3Q7RTX0 852 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 SYT2Q8N9I0 419 aaPredicted RBP17.96■□□□□ 0.47
LSM1-201ENST00000311351 CXCL16Q9H2A7 254 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 KMT5AQ9NQR1 393 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 SNTG2Q9NY99 539 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 ARHGAP28Q9P2N2 729 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 CACNG4Q9UBN1 327 aa17.96■□□□□ 0.47
LSM1-201ENST00000311351 ZMYM2Q9UBW7 1377 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 FSD2A1L4K1 749 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 K7ERI5 159 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 SLC16A4O15374 487 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 CLASP2O75122 1294 aaKnown RBP17.95■□□□□ 0.46
LSM1-201ENST00000311351 CXCL14O95715 111 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 ALDH2P05091 517 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 PLCG1P19174 1290 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 MARCKSP29966 332 aaPredicted RBP17.95■□□□□ 0.46
LSM1-201ENST00000311351 UBA7P41226 1012 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 CEBPZQ03701 1054 aaKnown RBP17.95■□□□□ 0.46
LSM1-201ENST00000311351 GRIK3Q13003 919 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 PTPN14Q15678 1187 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 ATF7IP2Q5U623 682 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 GJD3Q8N144 294 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 RABGGTAQ92696 567 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 SNX21Q969T3 373 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 RPS6KC1Q96S38 1066 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 ADPGKQ9BRR6 497 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 APOL5Q9BWW9 433 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 BLOC1S4Q9NUP1 217 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 USP15Q9Y4E8 981 aaPredicted RBP17.95■□□□□ 0.46
LSM1-201ENST00000311351 HCFC2Q9Y5Z7 792 aa17.95■□□□□ 0.46
LSM1-201ENST00000311351 PTGESO14684 152 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 STX6O43752 255 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 LONP1P36776 959 aaKnown RBP17.94■□□□□ 0.46
LSM1-201ENST00000311351 DHX8Q14562 1220 aaKnown RBP17.94■□□□□ 0.46
LSM1-201ENST00000311351 DCAF4L1Q3SXM0 396 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 SPECC1Q5M775 1068 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 ANKRD54Q6NXT1 300 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 USP49Q70CQ1 688 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 RASSF8Q8NHQ8 419 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 CALML4Q96GE6 196 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 TIPINQ9BVW5 301 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 GDAQ9Y2T3 454 aa17.94■□□□□ 0.46
LSM1-201ENST00000311351 CITO14578 2027 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 PLXNA3P51805 1871 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 SLC26A4O43511 780 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 SRGAP2BP0DMP2 458 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 MCM6Q14566 821 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 ARSHQ5FYA8 562 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 TMEM184AQ6ZMB5 413 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 GPBP1Q86WP2 473 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 ADHFE1Q8IWW8 467 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 KCTD17Q8N5Z5 321 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 CEP120Q8N960 986 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 EPSTI1Q96J88 318 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 USP28Q96RU2 1077 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 PAAF1Q9BRP4 392 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 HERC2P3Q9BVR0 1158 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 TARS2Q9BW92 718 aaKnown RBP17.93■□□□□ 0.46
LSM1-201ENST00000311351 CDT1Q9H211 546 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 EPHX3Q9H6B9 360 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 PRKAG3Q9UGI9 489 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 CDH22Q9UJ99 828 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 FBXO2Q9UK22 296 aaPredicted RBP17.93■□□□□ 0.46
LSM1-201ENST00000311351 TNFSF13BQ9Y275 285 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 IRAK3Q9Y616 596 aa17.93■□□□□ 0.46
LSM1-201ENST00000311351 C2CD2LO14523 706 aa17.92■□□□□ 0.46
LSM1-201ENST00000311351 SOD2P04179 222 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms