RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ANKFY1Q9P2R3 1169 aa19.58■□□□□ 0.72
SSSCA1-201ENST00000309328 PCDHA11Q9Y5I1 949 aa19.58■□□□□ 0.72
SSSCA1-201ENST00000309328 MYH11P35749 1972 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 TLL1O43897 1013 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 PRPF6O94906 941 aaKnown RBP19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 LDHAP00338 332 aaKnown RBP19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 ITGA4P13612 1032 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 GRM5P41594 1212 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 MATR3P43243 847 aaKnown RBP eCLIP19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 HTRA4P83105 476 aaPredicted RBP19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 KIAA0895Q8NCT3 520 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 TMEM174Q8WUU8 243 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 MSTO1Q9BUK6 570 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 EIF2AQ9BY44 585 aaKnown RBP19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 TMEM117Q9H0C3 514 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 CDT1Q9H211 546 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 MSRAQ9UJ68 235 aa19.57■□□□□ 0.72
SSSCA1-201ENST00000309328 A0A0B4J269 797 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 TTLL13PA6NNM8 815 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 DGKIO75912 1065 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 EDN1P05305 212 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 YARSP54577 528 aaKnown RBP19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 CAMK4Q16566 473 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 KLHL40Q2TBA0 621 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 CCDC183Q5T5S1 534 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 CMTR2Q8IYT2 770 aaKnown RBP19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 URGCPQ8TCY9 931 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 HPS3Q969F9 1004 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 TSPAN18Q96SJ8 248 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 RSAD1Q9HA92 442 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 KIAA1586Q9HCI6 787 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 TYW1Q9NV66 732 aaKnown RBP19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 MICAL3Q7RTP6 2002 aa19.56■□□□□ 0.72
SSSCA1-201ENST00000309328 PDXKO00764 312 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 ABLIM1O14639 778 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 OGTO15294 1046 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 INPPL1O15357 1258 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 UPP2O95045 317 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 CLTAP09496 248 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 ATF7P17544 494 aaPredicted RBP19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 TTC3P53804 2025 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 MYBPC2Q14324 1141 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 EEF1DP3Q658K8 133 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 C12orf56Q8IXR9 622 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 RNF169Q8NCN4 708 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 SMG8Q8ND04 991 aaKnown RBP19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 POMGNT1Q8WZA1 660 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 FGFBP2Q9BYJ0 223 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 MAN1B1Q9UKM7 699 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 COL4A6Q14031 1691 aa19.55■□□□□ 0.72
SSSCA1-201ENST00000309328 TMEM265A0A087WTH1 108 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 PSMA7O14818 248 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 CALUO43852 315 aaPredicted RBP19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 KCNA1Q09470 495 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 MORC3Q14149 939 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 ARMCX5Q6P1M9 558 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 FOXR2Q6PJQ5 311 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 LRRC43Q8N309 656 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 SP7Q8TDD2 431 aaPredicted RBP19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 ZNF689Q96CS4 500 aaPredicted RBP19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 ACAP3Q96P50 834 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 NXF3Q9H4D5 531 aaKnown RBP19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 PLEKHA5Q9HAU0 1116 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 RC3H2Q9HBD1 1191 aaKnown RBP19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 AGO2Q9UKV8 859 aaKnown RBP19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 RWDD3Q9Y3V2 267 aa19.54■□□□□ 0.72
SSSCA1-201ENST00000309328 NFIL3Q16649 462 aa19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 SLC39A4Q6P5W5 647 aa19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 AGMOQ6ZNB7 445 aa19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 RBM43Q6ZSC3 357 aaKnown RBP19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 ZBTB33Q86T24 672 aa19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 CDR2LQ86X02 465 aaPredicted RBP19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 CD302Q8IX05 232 aa19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 GLIS3Q8NEA6 775 aa19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 DHTKD1Q96HY7 919 aaPredicted RBP19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 RPS6KC1Q96S38 1066 aa19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 AGPAT3Q9NRZ7 376 aa19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 DACH1Q9UI36 760 aa19.53■□□□□ 0.72
SSSCA1-201ENST00000309328 RECQL4O94761 1208 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 LETM1O95202 739 aaPredicted RBP19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 RPL13P26373 211 aaKnown RBP19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 HOXD13P35453 343 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 BTG3Q14201 252 aaPredicted RBP19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 NOMO2Q5JPE7 1267 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 CT47A1Q5JQC4 288 aaPredicted RBP19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 SLC9A9Q8IVB4 645 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 NELFCDQ8IXH7 590 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 MLKLQ8NB16 471 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 ZBTB45Q96K62 511 aaPredicted RBP19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 SAMD11Q96NU1 681 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 TSG101Q99816 390 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 KCTD10Q9H3F6 313 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 AAASQ9NRG9 546 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 SNTG2Q9NY99 539 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 PARP2Q9UGN5 583 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 TRAF3IP3Q9Y228 551 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 USP20Q9Y2K6 914 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 GDAQ9Y2T3 454 aa19.52■□□□□ 0.72
SSSCA1-201ENST00000309328 LAMA2P24043 3122 aaKnown RBP19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 BICDL2A1A5D9 508 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms