RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 NGLY1Q96IV0 654 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 L3MBTL3Q96JM7 780 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-201ENST00000309017 C9orf72Q96LT7 481 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 SERPINB12Q96P63 405 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 OSBPL1AQ9BXW6 950 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 ACP6Q9NPH0 428 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 AGPAT3Q9NRZ7 376 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 NENFQ9UMX5 172 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 MSH4O15457 936 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 UPP2O95045 317 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 KRT15P19012 456 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 ALDH3A1P30838 453 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 RAD23BP54727 409 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 BFSP1Q12934 665 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 RRP1BQ14684 758 aaKnown RBP11.93□□□□□ -0.5
PTPN7-201ENST00000309017 CYFIP1Q7L576 1253 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 TBC1D22AQ8WUA7 517 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 FAM20AQ96MK3 541 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 FAM118BQ9BPY3 351 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 CCDC134Q9H6E4 229 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 ATF5Q9Y2D1 282 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-201ENST00000309017 ARHGEF35A5YM69 484 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 POC1B-GALNT4F8VUJ3 575 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 DDX39AO00148 427 aaKnown RBP11.93□□□□□ -0.5
PTPN7-201ENST00000309017 EML1O00423 815 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 CFBP00751 764 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 SNHG28P0DPA3 235 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 TARSP26639 723 aaKnown RBP11.93□□□□□ -0.5
PTPN7-201ENST00000309017 CHKAP35790 457 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 RBM5P52756 815 aaKnown RBP eCLIP11.93□□□□□ -0.5
PTPN7-201ENST00000309017 C11orf63Q6NUN7 778 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 ART4Q93070 314 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 CCDC189A1A4V9 331 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 ITGA8P53708 1063 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 CKAP2Q8WWK9 683 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 PWWP2AQ96N64 755 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 TMEM237Q96Q45 408 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 HEMGNQ9BXL5 484 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 ADAM33Q9BZ11 813 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 DNAJC18Q9H819 358 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 ADAM22Q9P0K1 906 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
PTPN7-201ENST00000309017 O00370 1275 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 CYP26A1O43174 497 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 GAS7O60861 476 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 RTN2O75298 545 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 SGPL1O95470 568 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 CTNNA2P26232 953 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 DNAJC3Q13217 504 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 PPP1R21Q6ZMI0 780 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 ETNPPLQ8TBG4 499 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 SNF8Q96H20 258 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 MKNK1Q9BUB5 465 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 OLFML3Q9NRN5 406 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 SCN7AQ01118 1682 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 MYBL1P10243 752 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 KRT5P13647 590 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 BMT2Q1RMZ1 405 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 HP1BP3Q5SSJ5 553 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-201ENST00000309017 ARHGEF19Q8IW93 802 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 ZDHHC14Q8IZN3 488 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 ANKRD35Q8N283 1001 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 KAT5Q92993 513 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 CCDC127Q96BQ5 260 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 NAF1Q96HR8 494 aaKnown RBP11.92□□□□□ -0.5
PTPN7-201ENST00000309017 LRRC37BQ96QE4 947 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 LBHD1Q9BQE6 289 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-201ENST00000309017 HAO1Q9UJM8 370 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 EIF3DO15371 548 aaKnown RBP eCLIP11.92□□□□□ -0.5
PTPN7-201ENST00000309017 NEFHP12036 1026 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 EEF2P13639 858 aaKnown RBP11.92□□□□□ -0.5
PTPN7-201ENST00000309017 TM4SF1P30408 202 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 MXRA7P84157 204 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 MFSD5Q6N075 450 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 VSTM1Q6UX27 236 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 NUDCD1Q96RS6 583 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 RPS6KC1Q96S38 1066 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 TMEM109Q9BVC6 243 aa11.92□□□□□ -0.5
PTPN7-201ENST00000309017 DDX4Q9NQI0 724 aaKnown RBP11.92□□□□□ -0.5
PTPN7-201ENST00000309017 MYH14Q7Z406 1995 aaKnown RBP11.91□□□□□ -0.5
PTPN7-201ENST00000309017 MEIS2O14770 477 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 SLC26A4O43511 780 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 TTC4O95801 387 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 ATP2B4P23634 1241 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 MAPK4P31152 587 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 GNPTABQ3T906 1256 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 ZBTB10Q96DT7 871 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 ANAPC7Q9UJX3 599 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 ZBTB21Q9ULJ3 1066 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 NHSL1Q5SYE7 1610 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 GOLGA8IPA6NC78 632 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 GOLGA8JA6NMD2 632 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 TBX3O15119 743 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 FOSP01100 380 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-201ENST00000309017 POLD1P28340 1107 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 MXI1P50539 228 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 CACNB3P54284 484 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 DLG4P78352 724 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 RNASELQ05823 741 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms