RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 GCLMP48507 274 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 GPC3P51654 580 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 SNRPFP62306 86 aaKnown RBP6.29□□□□□ -1.4
TTC39C-201ENST00000304621 NKX3-2P78367 333 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 TRIM14Q14142 442 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 FIGNQ5HY92 759 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 LMBRD2Q68DH5 695 aaPredicted RBP6.29□□□□□ -1.4
TTC39C-201ENST00000304621 CCSAPQ6IQ19 270 aaPredicted RBP6.29□□□□□ -1.4
TTC39C-201ENST00000304621 PDXDC1Q6P996 788 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 CXCL17Q6UXB2 119 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 CNGA4Q8IV77 575 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 GPD1LQ8N335 351 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 PARD3BQ8TEW8 1205 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 SEMA4DQ92854 862 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 WNT8BQ93098 351 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 CCDC127Q96BQ5 260 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 CPB2Q96IY4 423 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 JPH2Q9BR39 696 aaPredicted RBP6.29□□□□□ -1.4
TTC39C-201ENST00000304621 DESI2Q9BSY9 194 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 ADAMTS10Q9H324 1103 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 PTPRHQ9HD43 1115 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 NLRC4Q9NPP4 1024 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.29□□□□□ -1.4
TTC39C-201ENST00000304621 SPTLC3Q9NUV7 552 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 TRMT1Q9NXH9 659 aaKnown RBP6.29□□□□□ -1.4
TTC39C-201ENST00000304621 LUC7L2Q9Y383 392 aaKnown RBP6.29□□□□□ -1.4
TTC39C-201ENST00000304621 FHOD1Q9Y613 1164 aa6.29□□□□□ -1.4
TTC39C-201ENST00000304621 GRIN2DO15399 1336 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 LRRC53A6NM62 1247 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 INO80B-WBP1J3KQ70 363 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 MAPK13O15264 365 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 EXTL3O43909 919 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 FKTNO75072 461 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 EFNA5P52803 228 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 POLR2FP61218 127 aaKnown RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 ZBED6P86452 979 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 MYL7Q01449 175 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 PPP2R3AQ06190 1150 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 NOLC1Q14978 699 aaKnown RBP eCLIP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 KIZQ2M2Z5 673 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 GNASQ5JWF2 1037 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 KLHDC7AQ5VTJ3 777 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 TRIM65Q6PJ69 517 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 ZBTB8OSQ8IWT0 167 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 TMEM192Q8IY95 271 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 EXOC8Q8IYI6 725 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 CCAR2Q8N163 923 aaKnown RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 CEP120Q8N960 986 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 RETREG2Q8NC44 543 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 KLHDC9Q8NEP7 349 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 NEK11Q8NG66 645 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 OR8K1Q8NGG5 319 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 DNAJB3Q8WWF6 145 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 MSTO1Q9BUK6 570 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 MRPL4Q9BYD3 311 aaKnown RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 INO80BQ9C086 356 aaPredicted RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 TMEM117Q9H0C3 514 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 INTS2Q9H0H0 1204 aaKnown RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 GCNT4Q9P109 453 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 AGO2Q9UKV8 859 aaKnown RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 REXO2Q9Y3B8 237 aaKnown RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 NRCAMQ92823 1304 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 CNTNAP2Q9UHC6 1331 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 RRN3P2A6NIE6 340 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 ACKR2O00590 384 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 ASAP2O43150 1006 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 STX10O60499 249 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 ABL1P00519 1130 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 HMGCRP04035 888 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 INHAP05111 366 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 RARBP10826 455 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 CYP2C9P11712 490 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 KRT13P13646 458 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 MAP2K1Q02750 393 aaPredicted RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 MCL1Q07820 350 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 TFDP1Q14186 410 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 KCNA10Q16322 511 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 MEA1Q16626 185 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 MAPK6Q16659 721 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 EXOC3L4Q17RC7 722 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 NBPF20Q3BBV1 942 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 EPC2Q52LR7 807 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 ATF7IP2Q5U623 682 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 IQCEQ6IPM2 695 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 GDF6Q6KF10 455 aaPredicted RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 ZPBP2Q6X784 338 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 GBP6Q6ZN66 633 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 TSHZ1Q6ZSZ6 1077 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 INTS8Q75QN2 995 aaKnown RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 RRAGAQ7L523 313 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 ARHGEF19Q8IW93 802 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 REXO1L1PQ8IX06 675 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 ACRBPQ8NEB7 543 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 CCDC112Q8NEF3 446 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 TMC2Q8TDI7 906 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 TMEM40Q8WWA1 233 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 CCDC51Q96ER9 411 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 NUP58Q9BVL2 599 aa6.28□□□□□ -1.4
TTC39C-201ENST00000304621 NAA15Q9BXJ9 866 aaKnown RBP6.28□□□□□ -1.4
TTC39C-201ENST00000304621 NFKBIZQ9BYH8 718 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms