RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 COL4A3BPQ9Y5P4 624 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 OBSL1O75147 1896 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 TSPAN1O60635 241 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 RFPL2O75678 378 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 FCARP24071 287 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 GRIK3Q13003 919 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 MICU3Q86XE3 530 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 COLEC11Q9BWP8 271 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 RNF26Q9BY78 433 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-201ENST00000302278 TRPV4Q9HBA0 871 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 GDE1Q9NZC3 331 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 PLXND1Q9Y4D7 1925 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 ARHGEF37A1IGU5 675 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 RETP07949 1114 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 PSMC5P62195 406 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 GPC5P78333 572 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 CSRP2Q16527 193 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 PRR16Q569H4 304 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 B4GALNT3Q6L9W6 998 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 FUT10Q6P4F1 479 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 PPP4R3CPQ6ZMV5 832 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 DHX32Q7L7V1 743 aaKnown RBP7.25□□□□□ -1.25
ITGB1-201ENST00000302278 TMEM87AQ8NBN3 555 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 RNF169Q8NCN4 708 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 PHKBQ93100 1093 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 ESYT1Q9BSJ8 1104 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 MINDY3Q9H8M7 445 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 NCDNQ9UBB6 729 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 MTF2Q9Y483 593 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-201ENST00000302278 DKC1O60832 514 aaKnown RBP eCLIP7.24□□□□□ -1.25
ITGB1-201ENST00000302278 LYPLA2O95372 231 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 TARSP26639 723 aaKnown RBP7.24□□□□□ -1.25
ITGB1-201ENST00000302278 LRCH2Q5VUJ6 765 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 JAKMIP3Q5VZ66 844 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 SYNE3Q6ZMZ3 975 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 CATSPER4Q7RTX7 472 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 C4orf19Q8IY42 314 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 CCDC148Q8NFR7 591 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 TCP11Q8WWU5 503 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 CSRNP2Q9H175 543 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 KCNMB3Q9NPA1 279 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 SPATA6Q9NWH7 488 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-201ENST00000302278 ADAM28Q9UKQ2 775 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 MAFFQ9ULX9 164 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 CCDC196A0A1B0GTZ2 297 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 NCAM2O15394 837 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 GAS7O60861 476 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 ITGA4P13612 1032 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 PTENP60484 403 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 RAB33AQ14088 237 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 FAM187BQ17R55 369 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 PRSS36Q5K4E3 855 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 ZBTB41Q5SVQ8 909 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 LNX1Q8TBB1 728 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-201ENST00000302278 CLSTN3Q9BQT9 956 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 RPP25Q9BUL9 199 aaKnown RBP7.24□□□□□ -1.25
ITGB1-201ENST00000302278 MIOSQ9NXC5 875 aa7.24□□□□□ -1.25
ITGB1-201ENST00000302278 SEPT9Q9UHD8 586 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-201ENST00000302278 ARNTLO00327 626 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 LRRN2O75325 713 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 HMGB1P09429 215 aaKnown RBP7.23□□□□□ -1.25
ITGB1-201ENST00000302278 CSTF1Q05048 431 aaKnown RBP7.23□□□□□ -1.25
ITGB1-201ENST00000302278 SPIRE1Q08AE8 756 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 NPY5RQ15761 445 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 NOTUMQ6P988 496 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 C1orf228Q6PIY5 440 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 GET4Q7L5D6 327 aaPredicted RBP7.23□□□□□ -1.25
ITGB1-201ENST00000302278 FERMT3Q86UX7 667 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 RHPN2Q8IUC4 686 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 NPAS3Q8IXF0 933 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 FGF13Q92913 245 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 CCDC136Q96JN2 1154 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 FAM193BQ96PV7 902 aaPredicted RBP7.23□□□□□ -1.25
ITGB1-201ENST00000302278 GPR62Q9BZJ7 368 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 BACE2Q9Y5Z0 518 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 DOCK6Q96HP0 2047 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 SF3B1O75533 1304 aaKnown RBP eCLIP7.23□□□□□ -1.252e-9■■■■■ 80.4
ITGB1-201ENST00000302278 MAN2B1O00754 1011 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 TBX3O15119 743 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 KCNA4P22459 653 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 MBTD1Q05BQ5 628 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 LAMTOR4Q0VGL1 99 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 GALNT17Q6IS24 598 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 MIER3Q7Z3K6 550 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 ATRIPQ8WXE1 791 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 MRPS17Q9Y2R5 130 aaKnown RBP7.23□□□□□ -1.25
ITGB1-201ENST00000302278 GOLGA8AA7E2F4 631 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 GOLGA8BA8MQT2 603 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 FGFR3P22607 806 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 MTERF2Q49AM1 385 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 SPECC1Q5M775 1068 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 POTEHQ6S545 545 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 ZNF852Q6ZMS4 543 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 LOXL4Q96JB6 756 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 GMEB2Q9UKD1 530 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 INPP5FQ9Y2H2 1132 aa7.23□□□□□ -1.25
ITGB1-201ENST00000302278 FAM170BA6NMN3 283 aa7.22□□□□□ -1.25
ITGB1-201ENST00000302278 XYLBO75191 536 aa7.22□□□□□ -1.25
ITGB1-201ENST00000302278 CSDE1O75534 798 aaKnown RBP7.22□□□□□ -1.25
ITGB1-201ENST00000302278 IFNAR1P17181 557 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms