RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MTFR1Q15390 333 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 DAB2IPQ5VWQ8 1189 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 ARL6IP4Q66PJ3 421 aaKnown RBP15.4■□□□□ 0.06
CDT1-201ENST00000301019 EFCAB3Q8N7B9 438 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 FBXO41Q8TF61 875 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 MMTAG2Q9BU76 263 aaKnown RBP15.4■□□□□ 0.06
CDT1-201ENST00000301019 KRT82Q9NSB4 513 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 SEC63Q9UGP8 760 aaKnown RBP15.4■□□□□ 0.06
CDT1-201ENST00000301019 RASAL2Q9UJF2 1139 aa15.4■□□□□ 0.06
CDT1-201ENST00000301019 RBAK-RBAKDNI3L0D1 243 aa15.39■□□□□ 0.06
CDT1-201ENST00000301019 CBX3Q13185 183 aa15.39■□□□□ 0.06
CDT1-201ENST00000301019 PFKFB3Q16875 520 aaPredicted RBP15.39■□□□□ 0.06
CDT1-201ENST00000301019 PABPC1LQ4VXU2 614 aaKnown RBP15.39■□□□□ 0.06
CDT1-201ENST00000301019 SDCCAG8Q86SQ7 713 aaPredicted RBP15.39■□□□□ 0.06
CDT1-201ENST00000301019 RBM12BQ8IXT5 1001 aaKnown RBP15.39■□□□□ 0.06
CDT1-201ENST00000301019 PRELID2Q8N945 189 aa15.39■□□□□ 0.06
CDT1-201ENST00000301019 MAF1Q9H063 256 aa15.39■□□□□ 0.06
CDT1-201ENST00000301019 ACP6Q9NPH0 428 aa15.39■□□□□ 0.06
CDT1-201ENST00000301019 PCDHA4Q9UN74 947 aa15.39■□□□□ 0.06
CDT1-201ENST00000301019 NAALADL1Q9UQQ1 740 aa15.39■□□□□ 0.06
CDT1-201ENST00000301019 FLT1P17948 1338 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 KAT6BQ8WYB5 2073 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 NR2F2P24468 414 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 CA8P35219 290 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 CCR3P51677 355 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 GIT2Q14161 759 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 TTLL12Q14166 644 aaPredicted RBP15.39■□□□□ 0.05
CDT1-201ENST00000301019 USP6NLQ92738 828 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 HSPBAP1Q96EW2 488 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 TRMT112Q9UI30 125 aaKnown RBP15.39■□□□□ 0.05
CDT1-201ENST00000301019 USP17L3A6NCW0 530 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 USP17L4A6NCW7 530 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 E9PMD0 336 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 EEF2P13639 858 aaKnown RBP15.39■□□□□ 0.05
CDT1-201ENST00000301019 CA4P22748 312 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 RRP1BQ14684 758 aaKnown RBP15.39■□□□□ 0.05
CDT1-201ENST00000301019 LIN52Q52LA3 116 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 USP17L1Q7RTZ2 530 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 CCDC125Q86Z20 511 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 FBXO27Q8NI29 283 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 SH3TC2Q8TF17 1288 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.39■□□□□ 0.05
CDT1-201ENST00000301019 SHCBP1LQ9BZQ2 653 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 STMN4Q9H169 189 aaPredicted RBP15.39■□□□□ 0.05
CDT1-201ENST00000301019 BLOC1S4Q9NUP1 217 aa15.39■□□□□ 0.05
CDT1-201ENST00000301019 MAGEB6P1A0A0J9YX57 407 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 ANKRD62A6NC57 917 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 EIF4BP23588 611 aaKnown RBP15.38■□□□□ 0.05
CDT1-201ENST00000301019 MTA1Q13330 715 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 LMBRD2Q68DH5 695 aaPredicted RBP15.38■□□□□ 0.05
CDT1-201ENST00000301019 NLRP9Q7RTR0 991 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 RFWD2Q8NHY2 731 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 TBCKQ8TEA7 893 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.38■□□□□ 0.05
CDT1-201ENST00000301019 EBF3Q9H4W6 596 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 ZNF180Q9UJW8 692 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 GRID1Q9ULK0 1009 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 ITGB4P16144 1822 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 SFI1A8K8P3 1242 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 TDP2O95551 362 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 HARSP12081 509 aaKnown RBP15.38■□□□□ 0.05
CDT1-201ENST00000301019 CETN2P41208 172 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 KDSRQ06136 332 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 SLC34A1Q06495 639 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 GRB10Q13322 594 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 ECM1Q16610 540 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 TRAPPC9Q96Q05 1148 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 ZNF184Q99676 751 aaPredicted RBP15.38■□□□□ 0.05
CDT1-201ENST00000301019 HEMGNQ9BXL5 484 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 TUT1Q9H6E5 874 aaKnown RBP15.38■□□□□ 0.05
CDT1-201ENST00000301019 HDAC9Q9UKV0 1011 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 PSMG1O95456 288 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 CASP4P49662 377 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 TRMT1LQ7Z2T5 733 aaKnown RBP15.38■□□□□ 0.05
CDT1-201ENST00000301019 CCDC124Q96CT7 223 aaKnown RBP15.38■□□□□ 0.05
CDT1-201ENST00000301019 DYNLL2Q96FJ2 89 aa15.38■□□□□ 0.05
CDT1-201ENST00000301019 O00370 1275 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 RAD21O60216 631 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 GYG1P46976 350 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 HIRAP54198 1017 aaPredicted RBP15.37■□□□□ 0.05
CDT1-201ENST00000301019 PLEKHG4Q58EX7 1191 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 FAM26FQ5R3K3 315 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 LPCAT4Q643R3 524 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 ARHGEF18Q6ZSZ5 1173 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 HAUS1Q96CS2 278 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 GJD4Q96KN9 370 aaPredicted RBP15.37■□□□□ 0.05
CDT1-201ENST00000301019 C7orf25Q9BPX7 421 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 SIKE1Q9BRV8 207 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 COG5Q9UP83 839 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 ZNF510Q9Y2H8 683 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 SIGLEC16A6NMB1 481 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 MEIS1O00470 390 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 FGFR1P11362 822 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 RPA3P35244 121 aaPredicted RBP15.37■□□□□ 0.05
CDT1-201ENST00000301019 IL9RQ01113 521 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 RINLQ6ZS11 566 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 GATA6Q92908 595 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 CCSER1Q9C0I3 900 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 SMYD3Q9H7B4 428 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms