RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 CENPPQ6IPU0 288 aa10.9□□□□□ -0.66
GABRB3-201ENST00000299267 CHADLQ6NUI6 762 aa10.9□□□□□ -0.66
GABRB3-201ENST00000299267 KCTD6Q8NC69 237 aa10.9□□□□□ -0.66
GABRB3-201ENST00000299267 DNAJB3Q8WWF6 145 aa10.9□□□□□ -0.66
GABRB3-201ENST00000299267 MAP3K20Q9NYL2 800 aaKnown RBP10.9□□□□□ -0.66
GABRB3-201ENST00000299267 COL20A1Q9P218 1284 aa10.9□□□□□ -0.66
GABRB3-201ENST00000299267 EFCAB8A8MWE9 144 aa10.9□□□□□ -0.67
GABRB3-201ENST00000299267 BTBD19C9JJ37 291 aa10.9□□□□□ -0.67
GABRB3-201ENST00000299267 ATP2A2P16615 1042 aaKnown RBP10.9□□□□□ -0.67
GABRB3-201ENST00000299267 TUBB4BP68371 445 aa10.9□□□□□ -0.67
GABRB3-201ENST00000299267 GPC5P78333 572 aa10.9□□□□□ -0.67
GABRB3-201ENST00000299267 ADCY1Q08828 1119 aa10.9□□□□□ -0.67
GABRB3-201ENST00000299267 TMEM132DQ14C87 1099 aa10.9□□□□□ -0.67
GABRB3-201ENST00000299267 E2F4Q16254 413 aa10.9□□□□□ -0.67
GABRB3-201ENST00000299267 CXCL17Q6UXB2 119 aa10.9□□□□□ -0.67
GABRB3-201ENST00000299267 BTNL9Q6UXG8 535 aa10.9□□□□□ -0.67
GABRB3-201ENST00000299267 FNDC3AQ9Y2H6 1198 aaKnown RBP10.9□□□□□ -0.67
GABRB3-201ENST00000299267 PGRMC1O00264 195 aaKnown RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 STRNO43815 780 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 PSMD10O75832 226 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 CPT1AP50416 773 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 HIRAP54198 1017 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 ZNF280AP59817 542 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 NOP14P78316 857 aaKnown RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 ACVR2BQ13705 512 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 SPOPLQ6IQ16 392 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 RGMBQ6NW40 437 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 RIOX2Q8IUF8 465 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 TSNARE1Q96NA8 513 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 NUP85Q9BW27 656 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 MTMR12Q9C0I1 747 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 ABHD16BQ9H3Z7 469 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 KCNMB3Q9NPA1 279 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 KLHL11Q9NVR0 708 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 DOT1LQ8TEK3 1739 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 TRPM3Q9HCF6 1732 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 F5H423 210 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 BNIP3LO60238 219 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 PRPSAP2O60256 369 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 STK10O94804 968 aaKnown RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 ITGB3P05106 788 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 EZRP15311 586 aaKnown RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 YY1P25490 414 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 SLC35G1Q2M3R5 365 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 RBM43Q6ZSC3 357 aaKnown RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 CCDC91Q7Z6B0 441 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 LRRC45Q96CN5 670 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 MMTAG2Q9BU76 263 aaKnown RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 BTBD7Q9P203 1132 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 TRIM17Q9Y577 477 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 CCDC66A2RUB6 948 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 FOXN3O00409 490 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 TUBBP07437 444 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 ELF1P32519 619 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 LAMTOR4Q0VGL1 99 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 ITGB3BPQ13352 177 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 PLCB4Q15147 1175 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 RDM1Q8NG50 284 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 ZBTB10Q96DT7 871 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 IL17RAQ96F46 866 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 PRMT7Q9NVM4 692 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 FEZ2Q9UHY8 353 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-201ENST00000299267 MAD1L1Q9Y6D9 718 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 DUSP10Q9Y6W6 482 aa10.89□□□□□ -0.67
GABRB3-201ENST00000299267 ESYT3A0FGR9 886 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 TGFB3P10600 412 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 OAZ1P54368 228 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 HSDL1Q3SXM5 330 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 RNF180Q86T96 592 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 TLK2Q86UE8 772 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 MAP7D3Q8IWC1 876 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 TAS1R2Q8TE23 839 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 TIPINQ9BVW5 301 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 KATNAL1Q9BW62 490 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 SMARCAL1Q9NZC9 954 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 ZNF185O15231 689 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 EIF3DO15371 548 aaKnown RBP eCLIP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 TFRCP02786 760 aaKnown RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 LCP1P13796 627 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 KRT15P19012 456 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 GALCP54803 685 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 UGCGQ16739 394 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 DEFB115Q30KQ5 88 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 FAM102AQ5T9C2 384 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 ZNF564Q8TBZ8 553 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 MGARPQ8TDB4 240 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 HASPINQ8TF76 798 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 RNF139Q8WU17 664 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 TNFRSF25Q93038 417 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 AGPAT1Q99943 283 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 RAB17Q9H0T7 212 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 HEY1Q9Y5J3 304 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 YBX3P16989 372 aaKnown RBP eCLIP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 CTNNA1P35221 906 aaKnown RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 KCTD16Q68DU8 428 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 ATP8B4Q8TF62 1192 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 DHX38Q92620 1227 aaKnown RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 RABGGTAQ92696 567 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 FAM81BQ96LP2 452 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms