RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 SNX17Q15036 470 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 SYCP1Q15431 976 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 DCAF17Q5H9S7 520 aaPredicted RBP26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 EEF1DP3Q658K8 133 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 TMC2Q8TDI7 906 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 PARD3BQ8TEW8 1205 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 TCHPQ9BT92 498 aa26.82■■□□□ 1.88
GTF2A1-201ENST00000298173 PTMAP06454 111 aaKnown RBP26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 DLG4P78352 724 aa26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 MRPS6P82932 125 aaKnown RBP26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 CYP24A1Q07973 514 aa26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 HSP90AA2PQ14568 343 aaPredicted RBP26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 HS1BP3Q53T59 392 aa26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 TCERG1LQ5VWI1 586 aa26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 RSPH3Q86UC2 560 aa26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 ARMC5Q96C12 935 aa26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 CRISPLD2Q9H0B8 497 aa26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 DNAH12Q6ZR08 3092 aa26.81■■□□□ 1.88
GTF2A1-201ENST00000298173 A0A0U1RQG5 324 aaPredicted RBP26.8■■□□□ 1.88
GTF2A1-201ENST00000298173 HOXA11P31270 313 aaPredicted RBP26.8■■□□□ 1.88
GTF2A1-201ENST00000298173 ACOT2P49753 483 aa26.8■■□□□ 1.88
GTF2A1-201ENST00000298173 PTK7Q13308 1070 aa26.8■■□□□ 1.88
GTF2A1-201ENST00000298173 SEZ6LQ9BYH1 1024 aa26.8■■□□□ 1.88
GTF2A1-201ENST00000298173 PDZD7Q9H5P4 517 aa26.8■■□□□ 1.88
GTF2A1-201ENST00000298173 TRMT13Q9NUP7 481 aaKnown RBP26.8■■□□□ 1.88
GTF2A1-201ENST00000298173 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.8■■□□□ 1.883e-7■■■□□ 19.1
GTF2A1-201ENST00000298173 OGTO15294 1046 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 FGFR4P22455 802 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 MATR3P43243 847 aaKnown RBP eCLIP26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 GSDMDP57764 484 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 NOLC1Q14978 699 aaKnown RBP eCLIP26.79■■□□□ 1.882e-26■■■■■ 43.1
GTF2A1-201ENST00000298173 ZBTB41Q5SVQ8 909 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 ZBTB33Q86T24 672 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 GTPBP10A4D1E9 387 aaKnown RBP26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 ARVCFO00192 962 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 ERLIN2O94905 339 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 TRIM49P0CI25 452 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 TRIM49CP0CI26 452 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 FMO5P49326 533 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 KLK7P49862 253 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 CDK7P50613 346 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 CLDN10P78369 228 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 MGAT3Q09327 533 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 TRIM71Q2Q1W2 868 aaKnown RBP26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 CDR2LQ86X02 465 aaPredicted RBP26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 DHX38Q92620 1227 aaKnown RBP26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 CPB2Q96IY4 423 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 CDT1Q9H211 546 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 TRPV2Q9Y5S1 764 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 CDY2AQ9Y6F7 541 aa26.79■■□□□ 1.88
GTF2A1-201ENST00000298173 CHRNA1P02708 482 aa26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 GYPCP04921 128 aa26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 PPP3CAQ08209 521 aa26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 RBL2Q08999 1139 aa26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 ARID5BQ14865 1188 aa26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 PSMD6Q15008 389 aa26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 ZNF568Q3ZCX4 644 aa26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 FIGNQ5HY92 759 aa26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 TTYH3Q9C0H2 523 aa26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 CPSF3Q9UKF6 684 aaKnown RBP26.78■■□□□ 1.88
GTF2A1-201ENST00000298173 PMM2O15305 246 aa26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 SGPL1O95470 568 aa26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 MCF2P10911 925 aa26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 CBWD6Q4V339 395 aa26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 CBWD3Q5JTY5 395 aa26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 CBWD5Q5RIA9 395 aa26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 DPY19L2P1Q6NXN4 242 aa26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 CATSPER4Q7RTX7 472 aa26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 NUP58Q9BVL2 599 aa26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 SENP6Q9GZR1 1112 aaPredicted RBP26.77■■□□□ 1.88
GTF2A1-201ENST00000298173 SFPQP23246 707 aaKnown RBP eCLIP26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 AXLP30530 894 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 MNX1P50219 401 aaPredicted RBP26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 CACTINQ8WUQ7 758 aaKnown RBP26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 LRRIQ3A6PVS8 624 aaPredicted RBP26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 M0QZ92 97 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 RNF225M0QZC1 329 aaPredicted RBP26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 TNFSF9P41273 254 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 WNT7BP56706 349 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 TRIM14Q14142 442 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 TMEM132AQ24JP5 1023 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 SEZ6Q53EL9 994 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 FAM26DQ5JW98 314 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 USP37Q86T82 979 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 LRRC8AQ8IWT6 810 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 TC2NQ8N9U0 490 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 CCDC127Q96BQ5 260 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 CRACR2AQ9BSW2 395 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 AGPAT5Q9NUQ2 364 aa26.76■■□□□ 1.87
GTF2A1-201ENST00000298173 P4HA2O15460 535 aa26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 B4GALT4O60513 344 aa26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 HARSP12081 509 aaKnown RBP26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 POU5F1Q01860 360 aaKnown RBP26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 NCBP1Q09161 790 aaKnown RBP26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 PPFIBP1Q86W92 1011 aa26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 BRSK2Q8IWQ3 736 aa26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 U2AF1L4Q8WU68 220 aaKnown RBP26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 TRIM44Q96DX7 344 aaPredicted RBP26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 POP1Q99575 1024 aaKnown RBP26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 TRPV6Q9H1D0 765 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms