RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CYP26B1Q9NR63 512 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 PARVAQ9NVD7 372 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 MID2Q9UJV3 735 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 KCNH4Q9UQ05 1017 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 PLAAQ9Y263 795 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 TNS2Q63HR2 1409 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 SLC9A1P19634 815 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 IRX4P78413 519 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 COG7P83436 770 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 DBN1Q16643 649 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 ZNF449Q6P9G9 518 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 LRRC71Q8N4P6 559 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 C18orf8Q96DM3 657 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 WDR24Q96S15 920 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 POLR3CQ9BUI4 534 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-201ENST00000277575 ERAP1Q9NZ08 941 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 EVI5O60447 810 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 RTN2O75298 545 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 ATP1A1P05023 1023 aaKnown RBP11.99□□□□□ -0.49
USP6NL-201ENST00000277575 IL1R1P14778 569 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 EFHC2Q5JST6 749 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 MKNK1Q9BUB5 465 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 SIK2Q9H0K1 926 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 EHD4Q9H223 541 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 GOLGA8MH3BSY2 632 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 HBP1O60381 514 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 KRT3P12035 628 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 CYP11B2P19099 503 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 GALCP54803 685 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 CDH6P55285 790 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 STX1BP61266 288 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 EXOC4Q96A65 974 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 GPRASP2Q96D09 838 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 TARS2Q9BW92 718 aaKnown RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 ZFYVE28Q9HCC9 887 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 BAZ2BQ9UIF8 2168 aaKnown RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 ITIH6Q6UXX5 1313 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 MOCS2O96007 188 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 CPB1P15086 417 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 CAV1Q03135 178 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 NBPF9Q3BBW0 867 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 HEATR6Q6AI08 1181 aaKnown RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 AFG1LQ8WV93 481 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 KATNAL1Q9BW62 490 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 TMX2Q9Y320 296 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 FHOD1Q9Y613 1164 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 RECQLP46063 649 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 BACE1P56817 501 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 TGFB2P61812 414 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 TMEM62Q0P6H9 643 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 NME3Q13232 169 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 TMEM132DQ14C87 1099 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 SGSM1Q2NKQ1 1148 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 IER5Q5VY09 327 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 SYT2Q8N9I0 419 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 SPATA4Q8NEY3 305 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 RDM1Q8NG50 284 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 SLC30A5Q8TAD4 765 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 DHX38Q92620 1227 aaKnown RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 RNPC3Q96LT9 517 aaKnown RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 NOC2LQ9Y3T9 749 aaKnown RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 IGSF9BQ9UPX0 1349 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 COL5A2P05997 1499 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 GRID2IPA4D2P6 1211 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 EIF3DO15371 548 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 CELF2O95319 508 aaKnown RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 CYP2C9P11712 490 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 TAP1Q03518 808 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 E4F1Q66K89 784 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 CCDC137Q6PK04 289 aaKnown RBP11.98□□□□□ -0.49
USP6NL-201ENST00000277575 BAG5Q9UL15 447 aa11.98□□□□□ -0.49
USP6NL-201ENST00000277575 GOLGA8QA0A0J9YX86 632 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 GOLGA8OA6NCC3 632 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 GOLGA8NF8WBI6 632 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 KRT38O76015 456 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 GPS1Q13098 491 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 NUGGCQ68CJ6 796 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 CC2D1AQ6P1N0 951 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-201ENST00000277575 ERO1BQ86YB8 467 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 FSD1LQ9BXM9 530 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 DDX56Q9NY93 547 aaKnown RBP11.97□□□□□ -0.49
USP6NL-201ENST00000277575 FIS1Q9Y3D6 152 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 ACTR2P61160 394 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 NAA30Q147X3 362 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-201ENST00000277575 GNASQ5JWF2 1037 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 EFCAB12Q6NXP0 572 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 PARD3BQ8TEW8 1205 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 C1orf54Q8WWF1 131 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 GMCL1Q96IK5 515 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 PRMT7Q9NVM4 692 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-201ENST00000277575 LMCD1Q9NZU5 365 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 COL3A1P02461 1466 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-201ENST00000277575 TRAPPC3O43617 180 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 NFKBIAP25963 317 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 GSPT2Q8IYD1 628 aaKnown RBP11.97□□□□□ -0.49
USP6NL-201ENST00000277575 RBBP8NLQ8NC74 664 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-201ENST00000277575 SPON2Q9BUD6 331 aa11.97□□□□□ -0.49
USP6NL-201ENST00000277575 FAM187AA6NFU0 413 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 RASA4BC9J798 803 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 RASA4O43374 803 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms