RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 PCK1P35558 622 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 TMED2Q15363 201 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 GALNTL6Q49A17 601 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 PPM1KQ8N3J5 372 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 SPDYE1Q8NFV5 336 aaPredicted RBP13.84□□□□□ -0.19
COL8A1-202ENST00000273342 ZNF483Q8TF39 744 aaPredicted RBP13.84□□□□□ -0.19
COL8A1-202ENST00000273342 ART4Q93070 314 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 ZNF622Q969S3 477 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL8A1-202ENST00000273342 BORCS6Q96GS4 357 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 NUP85Q9BW27 656 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 OSBPL1AQ9BXW6 950 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 ZMYM2Q9UBW7 1377 aa13.84□□□□□ -0.19
COL8A1-202ENST00000273342 EMSYQ7Z589 1322 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 IRS2Q9Y4H2 1338 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 GOLGA8IPA6NC78 632 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 GOLGA8JA6NMD2 632 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 CYP26A1O43174 497 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 SNHG28P0DPA3 235 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 ADCY8P40145 1251 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 ITGA8P53708 1063 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 GPC5P78333 572 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 ANKLE1Q8NAG6 615 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 CCHCR1Q8TD31 782 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 UTP4Q969X6 686 aaKnown RBP13.83□□□□□ -0.19
COL8A1-202ENST00000273342 SAAL1Q96ER3 474 aa13.83□□□□□ -0.19
COL8A1-202ENST00000273342 PHLPP1O60346 1717 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 A0A1W2PRG0 241 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 OAS1P00973 400 aaKnown RBP13.83□□□□□ -0.2
COL8A1-202ENST00000273342 FOXN2P32314 431 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 PEX5P50542 639 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 RAD23BP54727 409 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 MTM1Q13496 603 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 PPP2R5EQ16537 467 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 GRIPAP1Q4V328 841 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 MIS18BP1Q6P0N0 1132 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 INTS8Q75QN2 995 aaKnown RBP13.83□□□□□ -0.2
COL8A1-202ENST00000273342 MIGA2Q7L4E1 593 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 SLC47A2Q86VL8 602 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 ZFPM1Q8IX07 1006 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 MYLK2Q9H1R3 596 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 RXFP1Q9HBX9 757 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 ARHGEF3Q9NR81 526 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 KCNQ5Q9NR82 932 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 PARP2Q9UGN5 583 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 PCYOX1Q9UHG3 505 aa13.83□□□□□ -0.2
COL8A1-202ENST00000273342 SLC16A3O15427 465 aaKnown RBP13.82□□□□□ -0.2
COL8A1-202ENST00000273342 HIP1RO75146 1068 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 SMNDC1O75940 238 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL8A1-202ENST00000273342 CBX6O95503 412 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 CTNNA2P26232 953 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 SSTR3P32745 418 aaPredicted RBP13.82□□□□□ -0.2
COL8A1-202ENST00000273342 DRG2P55039 364 aaKnown RBP13.82□□□□□ -0.2
COL8A1-202ENST00000273342 FAM196AQ6ZSG2 479 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 RHOT2Q8IXI1 618 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 ZNF653Q96CK0 615 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 SYT11Q9BT88 431 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 AGPAT3Q9NRZ7 376 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 NKIRAS1Q9NYS0 192 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 DIS3Q9Y2L1 958 aaKnown RBP13.82□□□□□ -0.2
COL8A1-202ENST00000273342 ZNF131P52739 623 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 ZNF564Q8TBZ8 553 aaPredicted RBP13.82□□□□□ -0.2
COL8A1-202ENST00000273342 TBC1D22AQ8WUA7 517 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 CKAP2Q8WWK9 683 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 NAALADL1Q9UQQ1 740 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 COL22A1Q8NFW1 1626 aaPredicted RBP13.82□□□□□ -0.2
COL8A1-202ENST00000273342 POC1B-GALNT4F8VUJ3 575 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 SSR1P43307 286 aaKnown RBP13.82□□□□□ -0.2
COL8A1-202ENST00000273342 PPP3CAQ08209 521 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 NFIAQ12857 509 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 DOK7Q18PE1 504 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 CNBD1Q8NA66 436 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 TTC8Q8TAM2 541 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 LENG9Q96B70 501 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 NAF1Q96HR8 494 aaKnown RBP13.82□□□□□ -0.2
COL8A1-202ENST00000273342 HERPUD2Q9BSE4 406 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 CCDC134Q9H6E4 229 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 PARVGQ9HBI0 331 aa13.82□□□□□ -0.2
COL8A1-202ENST00000273342 WDR91A4D1P6 747 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 RASA4BC9J798 803 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 TP73O15350 636 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 RASA4O43374 803 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 ENTPD5O75356 428 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
COL8A1-202ENST00000273342 SARNPP82979 210 aaKnown RBP13.81□□□□□ -0.2
COL8A1-202ENST00000273342 SPDYCQ5MJ68 293 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 BTNL9Q6UXG8 535 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 NOP9Q86U38 636 aaKnown RBP13.81□□□□□ -0.2
COL8A1-202ENST00000273342 C4orf33Q8N1A6 199 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 CCDC127Q96BQ5 260 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 RUNDC3BQ96NL0 473 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 BATF3Q9NR55 127 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 ZBTB21Q9ULJ3 1066 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.81□□□□□ -0.2
COL8A1-202ENST00000273342 MIF4GDA9UHW6 222 aaKnown RBP13.81□□□□□ -0.2
COL8A1-202ENST00000273342 G3V3G9 751 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 MAP3K13O43283 966 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 ALADP13716 330 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 GM2AP17900 193 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 EPHB2P29323 1055 aa13.81□□□□□ -0.2
COL8A1-202ENST00000273342 SHMT1P34896 483 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms