RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 LRRN2O75325 713 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 ZNF865P0CJ78 1059 aaPredicted RBP12.54□□□□□ -0.4
SCAF11-201ENST00000266589 RFX1P22670 979 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 STAT1P42224 750 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 ENPEPQ07075 957 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 DRAP1Q14919 205 aaPredicted RBP12.54□□□□□ -0.4
SCAF11-201ENST00000266589 OLFML2BQ68BL8 750 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 GJD2Q9UKL4 321 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 GNEQ9Y223 722 aaKnown RBP12.54□□□□□ -0.4
SCAF11-201ENST00000266589 BZW2Q9Y6E2 419 aaKnown RBP12.54□□□□□ -0.4
SCAF11-201ENST00000266589 RBAK-RBAKDNI3L0D1 243 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 ASAP2O43150 1006 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 CA12O43570 354 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 URI1O94763 535 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 GFPT2O94808 682 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 LDHAP00338 332 aaKnown RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 HARSP12081 509 aaKnown RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 CTGFP29279 349 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 GTF2H1P32780 548 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 SOX5P35711 763 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 PRKCIP41743 596 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 PTK2Q05397 1052 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 KIF5AQ12840 1032 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 PPFIA1Q13136 1202 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 HSP90AA2PQ14568 343 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 CYP4F22Q6NT55 531 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 CRELD2Q6UXH1 353 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 TLK2Q86UE8 772 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 SLC35F6Q8N357 371 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 TSGA10Q9BZW7 698 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 GPR88Q9GZN0 384 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 CLDN3O15551 220 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 TOM1L1O75674 476 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 FERP16591 822 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 MAGEA1P43355 309 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 PSMD6Q15008 389 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 GRIK4Q16099 956 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 SLC18A3Q16572 532 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 ARHGAP44Q17R89 818 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 ZBTB41Q5SVQ8 909 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 MTHFD1LQ6UB35 978 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 ZNF571Q7Z3V5 609 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 LINC01465Q8N7H1 131 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 FNBP1Q96RU3 617 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 ACO2Q99798 780 aaKnown RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 L2HGDHQ9H9P8 463 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 UBE2TQ9NPD8 197 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 RBAKQ9NYW8 714 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-201ENST00000266589 ADAMTS1Q9UHI8 967 aa12.53□□□□□ -0.4
SCAF11-201ENST00000266589 A0A087X0T9 212 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 A6NJR5 290 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 EVI5O60447 810 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 FAM228BP0C875 321 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 TMOD1P28289 359 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 WNT7BP56706 349 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 PTENP60484 403 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 SV2AQ7L0J3 742 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 ZBTB33Q86T24 672 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 FBXL13Q8NEE6 735 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 SEMA4DQ92854 862 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 PPP1R16BQ96T49 567 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 TCHPQ9BT92 498 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 INO80BQ9C086 356 aaPredicted RBP12.52□□□□□ -0.4
SCAF11-201ENST00000266589 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.45e-7■■■■■ 40.9
SCAF11-201ENST00000266589 AKT3Q9Y243 479 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 COQ4Q9Y3A0 265 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.4
SCAF11-201ENST00000266589 KAT6AQ92794 2004 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 TNNI1P19237 187 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 PHKA2P46019 1235 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 CHMP4BP1P59074 171 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 CLDN10P78369 228 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 MBTD1Q05BQ5 628 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 SEZ6Q53EL9 994 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 LMBRD2Q68DH5 695 aaPredicted RBP12.52□□□□□ -0.41
SCAF11-201ENST00000266589 FMNL3Q8IVF7 1028 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 TAS1R2Q8TE23 839 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 NFKBIZQ9BYH8 718 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 FZD8Q9H461 694 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 MINDY3Q9H8M7 445 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 PDE11AQ9HCR9 933 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 RAB20Q9NX57 234 aa12.52□□□□□ -0.41
SCAF11-201ENST00000266589 MACROD2A1Z1Q3 448 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 CTAGE9A4FU28 777 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 ACKR2O00590 384 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 F2P00734 622 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 IGHA2P01877 340 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 VTNP04004 478 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 GPC3P51654 580 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 PRPF4BQ13523 1007 aaKnown RBP12.51□□□□□ -0.41
SCAF11-201ENST00000266589 TMEM132AQ24JP5 1023 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 MARCH8Q5T0T0 291 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 TSHZ1Q6ZSZ6 1077 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms