RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 ZDHHC15Q96MV8 337 aa16.9■□□□□ 0.3
DDX1-201ENST00000233084 GBP5Q96PP8 586 aa16.9■□□□□ 0.3
DDX1-201ENST00000233084 UIMC1Q96RL1 719 aa16.9■□□□□ 0.3
DDX1-201ENST00000233084 DDX3YO15523 660 aaKnown RBP16.89■□□□□ 0.29
DDX1-201ENST00000233084 CREB3O43889 395 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 PDIA5Q14554 519 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 KHDC1Q4VXA5 237 aaKnown RBP16.89■□□□□ 0.29
DDX1-201ENST00000233084 TNFAIP8L3Q5GJ75 292 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 RASIP1Q5U651 963 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 ATL2Q8NHH9 583 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 IFT43Q96FT9 208 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 LRRC37BQ96QE4 947 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 NDNQ99608 321 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 AJAP1Q9UKB5 411 aaPredicted RBP16.89■□□□□ 0.29
DDX1-201ENST00000233084 CHKBQ9Y259 395 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 MYO3BQ8WXR4 1341 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 FAM187AA6NFU0 413 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 DDX3XO00571 662 aaKnown RBP eCLIP16.89■□□□□ 0.295e-16■■□□□ 13.3
DDX1-201ENST00000233084 USP17L8P0C7I0 530 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 UBTFL6P0CB48 400 aaPredicted RBP16.89■□□□□ 0.29
DDX1-201ENST00000233084 GOLGA8HP0CJ92 632 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 CYP2D6P10635 497 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 DYNC1I2Q13409 638 aaKnown RBP16.89■□□□□ 0.29
DDX1-201ENST00000233084 RFWD3Q6PCD5 774 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 MAPKAPK5Q8IW41 473 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 SCG3Q8WXD2 468 aaKnown RBP16.89■□□□□ 0.29
DDX1-201ENST00000233084 JDP2Q8WYK2 163 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 SPOCK2Q92563 424 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 NT5C3AQ9H0P0 336 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 SERPINA10Q9UK55 444 aa16.89■□□□□ 0.29
DDX1-201ENST00000233084 ZCCHC18P0CG32 403 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 COASYQ13057 564 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 MTFR1Q15390 333 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 ZCWPW2Q504Y3 356 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 SNX30Q5VWJ9 437 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 CROCCP2Q86T23 111 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 SRRM1Q8IYB3 904 aaKnown RBP16.88■□□□□ 0.29
DDX1-201ENST00000233084 ENDOVQ8N8Q3 282 aaKnown RBP16.88■□□□□ 0.29
DDX1-201ENST00000233084 DTX3LQ8TDB6 740 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 ALG3Q92685 438 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 ZHX3Q9H4I2 956 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 MCM9Q9NXL9 1143 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 IGSF9BQ9UPX0 1349 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 FOXN2P32314 431 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 KCNJ1P48048 391 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 DHX34Q14147 1143 aaKnown RBP16.88■□□□□ 0.29
DDX1-201ENST00000233084 EXOC3L4Q17RC7 722 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 DCAF17Q5H9S7 520 aaPredicted RBP16.88■□□□□ 0.29
DDX1-201ENST00000233084 CDC42EP5Q6NZY7 148 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 TTC27Q6P3X3 843 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 TRAPPC9Q96Q05 1148 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 CDC42EP4Q9H3Q1 356 aaKnown RBP16.88■□□□□ 0.29
DDX1-201ENST00000233084 CTTNBP2NLQ9P2B4 639 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 LRCH1Q9Y2L9 728 aa16.88■□□□□ 0.29
DDX1-201ENST00000233084 CETN3O15182 167 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 GFPT2O94808 682 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 RARGP13631 454 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 DNAJC3Q13217 504 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 RCN1Q15293 331 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 TCERG1LQ5VWI1 586 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 VPS36Q86VN1 386 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 SNX29Q8TEQ0 813 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 SLC7A6OSQ96CW6 309 aaPredicted RBP16.87■□□□□ 0.29
DDX1-201ENST00000233084 TMEM165Q9HC07 324 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 SH3GLB2Q9NR46 395 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 SEPT11Q9NVA2 429 aaKnown RBP16.87■□□□□ 0.29
DDX1-201ENST00000233084 TMEM110-MUSTN1A8MSY1 372 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 ETS2P15036 469 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 VHLP40337 213 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 PTGIRP43119 386 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 POLGP54098 1239 aaPredicted RBP16.87■□□□□ 0.29
DDX1-201ENST00000233084 NAPAP54920 295 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 NONOQ15233 471 aaKnown RBP eCLIP16.87■□□□□ 0.29
DDX1-201ENST00000233084 SLC35G1Q2M3R5 365 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 FAM26FQ5R3K3 315 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 MFSD5Q6N075 450 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 GLYCTKQ8IVS8 523 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 CYP4X1Q8N118 509 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 NRG4Q8WWG1 115 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 POP1Q99575 1024 aaKnown RBP16.87■□□□□ 0.29
DDX1-201ENST00000233084 TMEM109Q9BVC6 243 aa16.87■□□□□ 0.29
DDX1-201ENST00000233084 SEC63Q9UGP8 760 aaKnown RBP16.87■□□□□ 0.29
DDX1-201ENST00000233084 CYTH3O43739 400 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 SKIP12755 728 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 CCDC137Q6PK04 289 aaKnown RBP16.86■□□□□ 0.29
DDX1-201ENST00000233084 CCDC105Q8IYK2 499 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 PNMA1Q8ND90 353 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 TBCKQ8TEA7 893 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 RAD54LQ92698 747 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 GJA10Q969M2 543 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 OPTNQ96CV9 577 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 DCLRE1BQ9H816 532 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 PREBQ9HCU5 417 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 SLCO1B3Q9NPD5 702 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 DDX4Q9NQI0 724 aaKnown RBP16.86■□□□□ 0.29
DDX1-201ENST00000233084 USP40Q9NVE5 1235 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 NKIRAS1Q9NYS0 192 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 STOML1Q9UBI4 398 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms