RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 POMCP01189 267 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 NFRKBQ6P4R8 1299 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 GPR142Q7Z601 462 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 HDAC11Q96DB2 347 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 SAR1BQ9Y6B6 198 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 ZWINTO95229 277 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 ATF2P15336 505 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 CTNNB1P35222 781 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 RCAN1P53805 252 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 APOBEC3HQ6NTF7 200 aaKnown RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 FSD1LQ9BXM9 530 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 ZMYND8Q9ULU4 1186 aaPredicted RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 WDR19Q8NEZ3 1342 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 CSDE1O75534 798 aaKnown RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 TBXAS1P24557 533 aaPredicted RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 WEE1P30291 646 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 SDC4P31431 198 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 ATXN3P54252 364 aaPredicted RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 BASP1P80723 227 aaKnown RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 CDK17Q00537 523 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 CNTN2Q02246 1040 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 DDX4Q9NQI0 724 aaKnown RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 SEL1LQ9UBV2 794 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 RGS7P49802 495 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 PSMC1P62191 440 aaKnown RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 LRRC63Q05C16 580 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 C10orf120Q5SQS8 335 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 EEF1GP26641 437 aaKnown RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 GRIK4Q16099 956 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.67□□□□□ -0.06
SIX4-201ENST00000216513 PPP1R13BQ96KQ4 1090 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 MTA3Q9BTC8 594 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 AP1M1Q9BXS5 423 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 EMILIN2Q9BXX0 1053 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 UNC45AQ9H3U1 944 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 DPP7Q9UHL4 492 aa14.67□□□□□ -0.06
SIX4-201ENST00000216513 ARHGAP6O43182 974 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 TRIM49P0CI25 452 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 TRIM49CP0CI26 452 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 GUCY2DQ02846 1103 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 CTXN3Q4LDR2 81 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 EHD4Q9H223 541 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 HACD3Q9P035 362 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 RFX7Q2KHR2 1363 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 ODC1P11926 461 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 PPARGP37231 505 aaPredicted RBP14.66□□□□□ -0.06
SIX4-201ENST00000216513 NUMBP49757 651 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 PSEN2P49810 448 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 KIFC3Q9BVG8 833 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 YIPF2Q9BWQ6 316 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 PCSK1NQ9UHG2 260 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 G3BP2Q9UN86 482 aaKnown RBP14.66□□□□□ -0.06
SIX4-201ENST00000216513 CASTOR2A6NHX0 329 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 TLL1O43897 1013 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 ANO4Q32M45 955 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 TDRD10Q5VZ19 366 aaKnown RBP14.66□□□□□ -0.06
SIX4-201ENST00000216513 SLITRK1Q96PX8 696 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 SLC28A3Q9HAS3 691 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 FAM49BQ9NUQ9 324 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 KLHL8Q9P2G9 620 aaPredicted RBP14.66□□□□□ -0.06
SIX4-201ENST00000216513 CKMP06732 381 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 PHBP35232 272 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 CDC26Q8NHZ8 85 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 CDKL2Q92772 493 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 FAM102AQ5T9C2 384 aaPredicted RBP14.66□□□□□ -0.06
SIX4-201ENST00000216513 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
SIX4-201ENST00000216513 MRPS31Q92665 395 aaKnown RBP14.66□□□□□ -0.06
SIX4-201ENST00000216513 C11orf70Q9BRQ4 267 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 CYP26B1Q9NR63 512 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.66□□□□□ -0.06
SIX4-201ENST00000216513 RWDD2AQ9UIY3 292 aa14.66□□□□□ -0.06
SIX4-201ENST00000216513 ZBED1O96006 694 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 PCSK1P29120 753 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 MAP2K5Q13163 448 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 SLC12A1Q13621 1099 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 EFHC2Q5JST6 749 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 HP1BP3Q5SSJ5 553 aaPredicted RBP14.65□□□□□ -0.06
SIX4-201ENST00000216513 CCDC13Q8IYE1 715 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 MYRIPQ8NFW9 859 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 APBA2Q99767 749 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 TINF2Q9BSI4 451 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 HEY1Q9Y5J3 304 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 COG7P83436 770 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 TMTC4Q5T4D3 741 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 CES5AQ6NT32 575 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 VTA1Q9NP79 307 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 CPP00450 1065 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 GARSP41250 739 aaKnown RBP14.65□□□□□ -0.06
SIX4-201ENST00000216513 ATP11AP98196 1134 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 SEZ6Q53EL9 994 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 GSPT2Q8IYD1 628 aaKnown RBP14.65□□□□□ -0.06
SIX4-201ENST00000216513 SH3KBP1Q96B97 665 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 UBE2OQ9C0C9 1292 aaKnown RBP14.65□□□□□ -0.06
SIX4-201ENST00000216513 TYW1Q9NV66 732 aaKnown RBP14.65□□□□□ -0.06
SIX4-201ENST00000216513 ASNSD1Q9NWL6 643 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 MAD2L2Q9UI95 211 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 FAM205AQ6ZU69 1335 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 WDR91A4D1P6 747 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms