RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ATP6V1G3Q96LB4 118 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 RNPC3Q96LT9 517 aaKnown RBP14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 IL1RL2Q9HB29 575 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 MRPL42Q9Y6G3 142 aaKnown RBP14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 HUS1O60921 280 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 IRF1P10914 325 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 BLVRAP53004 296 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 E4F1Q66K89 784 aaPredicted RBP14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 ACAD11Q709F0 780 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 SPATA4Q8NEY3 305 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 KIFC3Q9BVG8 833 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 PNMA2Q9UL42 364 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 RNF103-CHMP3A0A140T963 221 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 RXRBP28702 533 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 TMEM35BQ8NCS4 154 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 FLAD1Q8NFF5 587 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 RPAP3Q9H6T3 665 aaPredicted RBP14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 CASS4Q9NQ75 786 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 COL15A1P39059 1388 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 SLFN12LQ6IEE8 588 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 CDR2LQ86X02 465 aaPredicted RBP14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 C9orf72Q96LT7 481 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 TAL1P17542 331 aaPredicted RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 CPA2P48052 419 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 KCTD19Q17RG1 926 aaPredicted RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 TTLL6Q8N841 843 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 CDHR1Q96JP9 859 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 COG4Q9H9E3 785 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 FGFR1OP2Q9NVK5 253 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 SLC13A4Q9UKG4 626 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 ZNF609O15014 1411 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 CTSHP09668 335 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 MTMR2Q13614 643 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 RCSD1Q6JBY9 416 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 MASTLQ96GX5 879 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 RBM41Q96IZ5 413 aaKnown RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 MCEEQ96PE7 176 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 DRC3Q9H069 523 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 YY1AP1Q9H869 796 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 HSPBP1Q9NZL4 362 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 THEGQ9P2T0 379 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 GOLGA8QA0A0J9YX86 632 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 GOLGA8OA6NCC3 632 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 GOLGA8NF8WBI6 632 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 PAMP19021 973 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 YWHABP31946 246 aaKnown RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 JAK3P52333 1124 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 EFTUD2Q15029 972 aaKnown RBP eCLIP14.42□□□□□ -0.15e-6■■■■□ 20.9
TGFBR3-201ENST00000212355 CYP4A22Q5TCH4 519 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 MDM1Q8TC05 714 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 SP110Q9HB58 689 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 RBM12Q9NTZ6 932 aaKnown RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 hCG_1984214I3L0E3 225 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 EIF3EP60228 445 aaKnown RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 CCZ1BP86790 482 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 CCZ1P86791 482 aaPredicted RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 AMHR2Q16671 573 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 ZNF467Q7Z7K2 595 aaPredicted RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 DGKHQ86XP1 1220 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 KCTD17Q8N5Z5 321 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 ZNF713Q8N859 430 aaPredicted RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 AGPAT1Q99943 283 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 HSPA6P17066 643 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 FBXW4P57775 412 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 BHMTQ93088 406 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 NR1H4Q96RI1 486 aaPredicted RBP14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 MMP19Q99542 508 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 TRPC7Q9HCX4 862 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 SUN2Q9UH99 717 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 ATP8B3O60423 1300 aa14.42□□□□□ -0.1
TGFBR3-201ENST00000212355 PLEKP08567 350 aaPredicted RBP14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 RANBP1P43487 201 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 KCNJ1P48048 391 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 LONP2Q86WA8 852 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 FAM84BQ96KN1 310 aaPredicted RBP14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 PRPF4O43172 522 aaKnown RBP eCLIP14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 SDC4P31431 198 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 QARSP47897 775 aaKnown RBP14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 SULT1E1P49888 294 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 RNF149Q8NC42 400 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 ICA1LQ8NDH6 482 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 PMS1P54277 932 aaKnown RBP14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 PID1Q7Z2X4 250 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 UBA3Q8TBC4 463 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 CCDC188H7C350 402 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 SERPIND1P05546 499 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 SCP2P22307 547 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 HMGCS2P54868 508 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 RPS6P62753 249 aaKnown RBP14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 GRAMD4Q6IC98 578 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 CYFIP2Q96F07 1278 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 FEM1BQ9UK73 627 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 AGO2Q9UKV8 859 aaKnown RBP14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 MORF4L2Q15014 288 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 THEM5Q8N1Q8 247 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 GALNT4Q8N4A0 578 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 DACH2Q96NX9 599 aa14.41□□□□□ -0.1
TGFBR3-201ENST00000212355 REEP2Q9BRK0 252 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms