RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CNOT8Q9UFF9 292 aaKnown RBP12.94□□□□□ -0.34
CHPF2-201ENST00000035307 NOC2LQ9Y3T9 749 aaKnown RBP12.94□□□□□ -0.34
CHPF2-201ENST00000035307 CHD4Q14839 1912 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 TTI1O43156 1089 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 CETPP11597 493 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 VAMP7P51809 220 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 EMC2Q15006 297 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 CCDC6Q16204 474 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 TMEM270Q6UE05 265 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 RIT2Q99578 217 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 ACP6Q9NPH0 428 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 PHF20L1A8MW92 1017 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 GOLGA8MH3BSY2 632 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 NKRFO15226 690 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHPF2-201ENST00000035307 ATP8B1O43520 1251 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 KLRC4O43908 158 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 H2AFXP16104 143 aaPredicted RBP12.93□□□□□ -0.34
CHPF2-201ENST00000035307 STX2P32856 288 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 RARRES1P49788 294 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 YARSP54577 528 aaKnown RBP12.93□□□□□ -0.34
CHPF2-201ENST00000035307 BEX3Q00994 111 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 SLC18A3Q16572 532 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 CDO1Q16878 200 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 CCDC89Q8N998 374 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 TUFT1Q9NNX1 390 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 ITIH6Q6UXX5 1313 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 LRRIQ3A6PVS8 624 aaPredicted RBP12.93□□□□□ -0.34
CHPF2-201ENST00000035307 TRPA1O75762 1119 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 MAPK6Q16659 721 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 KIZQ2M2Z5 673 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 FUT8Q9BYC5 575 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 HSPBP1Q9NZL4 362 aa12.93□□□□□ -0.34
CHPF2-201ENST00000035307 SUCLA2Q9P2R7 463 aaPredicted RBP12.93□□□□□ -0.34
CHPF2-201ENST00000035307 ANO9A1A5B4 782 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 LRRD1A4D1F6 860 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 WDR91A4D1P6 747 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 RCCD1A6NED2 376 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 ZNF233A6NK53 670 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 F5H423 210 aaPredicted RBP12.92□□□□□ -0.34
CHPF2-201ENST00000035307 TBX3O15119 743 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 GLRA4Q5JXX5 417 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 C10orf76Q5T2E6 689 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 NRAPQ86VF7 1730 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 VSIG1Q86XK7 387 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 ETNPPLQ8TBG4 499 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 MTMR8Q96EF0 704 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 BTBD6Q96KE9 485 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 TXNRD2Q9NNW7 524 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 KCNMB3Q9NPA1 279 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 PLAGL2Q9UPG8 496 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 ADAMTS7Q9UKP4 1686 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 DUOX1Q9NRD9 1551 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 PI4K2BG5E9Z4 385 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 SART1O43290 800 aaKnown RBP12.92□□□□□ -0.34
CHPF2-201ENST00000035307 EZRP15311 586 aaKnown RBP12.92□□□□□ -0.34
CHPF2-201ENST00000035307 SFNP31947 248 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 TBX2Q13207 712 aaPredicted RBP12.92□□□□□ -0.34
CHPF2-201ENST00000035307 GNASQ5JWF2 1037 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 EFCAB12Q6NXP0 572 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 FMNL3Q8IVF7 1028 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 SPIRE2Q8WWL2 714 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 MED15Q96RN5 788 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 CALN1Q9BXU9 219 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 STMN4Q9H169 189 aaPredicted RBP12.92□□□□□ -0.34
CHPF2-201ENST00000035307 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 TMEM206Q9H813 350 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 OPLAHO14841 1288 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 TBC1D12O60347 775 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 ATF2P15336 505 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 MTMR3Q13615 1198 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 LRRC14Q15048 493 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 HSDL1Q3SXM5 330 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 ARSHQ5FYA8 562 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 XKR3Q5GH77 459 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 MCPH1Q8NEM0 835 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 ADPGKQ9BRR6 497 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 GGT7Q9UJ14 662 aa12.92□□□□□ -0.34
CHPF2-201ENST00000035307 CCNE2O96020 404 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 CLTAP09496 248 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 NPTX2P47972 431 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 ALDH5A1P51649 535 aaPredicted RBP12.91□□□□□ -0.34
CHPF2-201ENST00000035307 KIF22Q14807 665 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHPF2-201ENST00000035307 PRPF31Q8WWY3 499 aaKnown RBP12.91□□□□□ -0.34
CHPF2-201ENST00000035307 ZWILCHQ9H900 591 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 INTS9Q9NV88 658 aaKnown RBP12.91□□□□□ -0.34
CHPF2-201ENST00000035307 WRAP73Q9P2S5 460 aaPredicted RBP12.91□□□□□ -0.34
CHPF2-201ENST00000035307 PNMA2Q9UL42 364 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 SGK1O00141 431 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 MYO1CO00159 1063 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 PSMD10O75832 226 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 HTRA3P83110 453 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 PCNX4Q63HM2 1172 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 INTS8Q75QN2 995 aaKnown RBP12.91□□□□□ -0.34
CHPF2-201ENST00000035307 SH3RF1Q7Z6J0 888 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 VSIG10LQ86VR7 867 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 CCDC13Q8IYE1 715 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms