RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Six6os1Q9CTN5 574 aa10.93□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Slc40a1Q9JHI9 570 aa10.93□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Rilpl1Q9JJC6 406 aa10.93□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Edf1Q9JMG1 148 aaKnown RBP10.93□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 H2-OaQ9QWV1 250 aa10.93□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Cog1Q9Z160 980 aa10.93□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Plcg1Q62077 1302 aa10.93□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Myo5aQ99104 1853 aaKnown RBP10.93□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 DgkiD3YWQ0 1071 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Olfr552E9Q545 317 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 4933406M09RikG3XA12 479 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Zfpm1O35615 995 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 P01734 135 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Bbof1Q3V079 533 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Gngt1Q61012 74 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Rufy1Q8BIJ7 712 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Fbxo38Q8BMI0 1194 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 AopepQ8BXQ6 817 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Fam193aQ8CGI1 1231 aaKnown RBP10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 LgsnQ8CIX8 563 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 SfpqQ8VIJ6 699 aaKnown RBP10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Pcdhgb4Q91XX6 912 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 PpanQ91YU8 470 aaKnown RBP10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Psmd6Q99JI4 389 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Tnpo2Q99LG2 887 aaKnown RBP10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Cpne8Q9DC53 577 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Xab2Q9DCD2 855 aaKnown RBP10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Nudt12Q9DCN1 462 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 SyncQ9EPM5 470 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 PorcnQ9JJJ7 461 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ddx20Q9JJY4 825 aaKnown RBP10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Dicer1Q8R418 1916 aa10.92□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Syngap1F6SEU4 1340 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Oog1E9Q5G7 496 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Stra6O70491 670 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ctnna1P26231 906 aaKnown RBP10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Xrcc5P27641 732 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 RelaQ04207 549 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Lrriq3Q14DL3 633 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Arl14Q3SXC5 192 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ctnna2Q61301 953 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Scaf8Q6DID3 1268 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Cyfip1Q7TMB8 1253 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Plppr4Q7TME0 766 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Zic5Q7TQ40 622 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Supt20hQ7TT00 530 aaKnown RBP10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Gjd4Q8BSD4 364 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Hook3Q8BUK6 718 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Epc2Q8C0I4 808 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Mrpl58Q8R035 206 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Znf830Q8R1N0 363 aaKnown RBP10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 BbxQ8VBW5 907 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Vwa5aQ99KC8 793 aaKnown RBP10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Tlr3Q99MB1 905 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ccdc91Q9D8L5 442 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Spock2Q9ER58 423 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Drg2Q9QXB9 364 aaKnown RBP10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Arih1Q9Z1K5 555 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ppfia4B8QI36 1187 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 DgkhD3YXJ0 1156 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Myo1eE9Q634 1107 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 EpoP07321 192 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Klra1P20937 262 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 VegfaQ00731 214 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 SpoplQ2M2N2 392 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Kmt5aQ2YDW7 349 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ppp1r7Q3UM45 361 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Oca2Q62052 833 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Six1Q62231 284 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Igsf3Q6ZQA6 1194 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Rnf139Q7TMV1 668 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Fgd5Q80UZ0 1219 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Lca5lQ8C0X0 741 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ppm1fQ8CGA0 452 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Stoml1Q8CI66 399 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Unc5bQ8K1S3 945 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Wrap53Q8VC51 532 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Acot11Q8VHQ9 594 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 ArpinQ9D0A3 226 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Rab11fip1Q9D620 645 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 PlekQ9JHK5 350 aaKnown RBP10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Rnf14Q9JI90 485 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Usp21Q9QZL6 566 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Tll2Q9WVM6 1012 aa10.91□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 2210011C24RikA0A087WQ89 206 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Zscan4-ps3A0A1B0GRH6 506 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Zscan4-ps2A0A1C7CYU6 506 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ttc13A0A1L1SSC7 844 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Lrrc74aA0A1Y7VMD6 494 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Arhgef10lA2AWP8 1280 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Dcdc2bF7BCK0 340 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Pitpnm1O35954 1243 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 CfhP06909 1234 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 FlgP11088 336 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Rhox5P52651 210 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 HelqQ2VPA6 1069 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ccdc125Q5U465 500 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ugt1a9Q62452 528 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Sestd1Q80UK0 696 aa10.9□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Nop53Q8BK35 484 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms