RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 GopcQ8BH60 463 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Tcaf1Q8BNE1 924 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Ccdc150Q8CDI7 1110 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Frat2Q8K025 231 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Mtmr3Q8K296 1196 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Fam151aQ8QZW3 608 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Tada3Q8R0L9 432 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Washc1Q8VDD8 475 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Uhrf1Q8VDF2 782 aaKnown RBP16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Igdcc4Q9EQS9 1252 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Arhgef7Q9ES28 862 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Sgpp1Q9JI99 430 aa16.87■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Apol7aB2RT54 418 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Terf2O35144 541 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Entpd2O55026 495 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 IkbkbO88351 757 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Fgfr1P16092 822 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Ca8P28651 291 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Nsun7Q14AW5 724 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Hace1Q3U0D9 909 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Rad9bQ6WBX7 403 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 ToporsQ80Z37 1033 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Ostm1Q8BGT0 338 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Zdhhc14Q8BQQ1 489 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Q8CCC3 530 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 DarsQ922B2 501 aaKnown RBP16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Castor1Q9CWQ8 331 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Mis18aQ9CZJ6 204 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 GatmQ9D964 423 aaKnown RBP16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Fgf22Q9ESS2 162 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Noa1Q9JJG9 693 aaKnown RBP16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Tnfrsf10bQ9QZM4 381 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Pla2g2fQ9QZT4 168 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 TfebQ9R210 475 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Col6a3E9PWQ3 3284 aa16.86■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Igkv17-121A0A0G2JFA8 117 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Clca3bE9PUL3 1044 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Tcp10bE9PYJ0 438 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Tcp10cE9Q046 482 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 BC049352E9Q2Z6 85 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Heatr4E9Q357 955 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 2010300C02RikE9Q3M9 1175 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Psmc3O88685 442 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Nudt1P53368 156 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Smad4P97471 551 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 H2-Q2Q4KN81 360 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Rsad1Q5SUV1 442 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Cdc37Q61081 379 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Pcdhb14Q6PB90 796 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 CyldQ80TQ2 952 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Tspan18Q80WR1 248 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Reps2Q80XA6 521 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Liat1Q810M6 228 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Usp37Q8C0R0 979 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Tada2aQ8CHV6 443 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Tmem161aQ8VCA6 480 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Olfr30Q8VGD8 315 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Olfr393Q8VGR6 312 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Nmnat1Q9EPA7 285 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Scyl1Q9EQC5 806 aaKnown RBP16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Olig1Q9JKN5 260 aa16.85■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Ttc3O88196 1979 aaKnown RBP16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Gm45015A0A140LII9 184 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Gm18336A0A140LIU8 765 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Gm4907B1AXB9 411 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Serpina16D3Z660 418 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Maml3D4QGC2 1135 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 TertO70372 1122 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Lsp1P19973 330 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Ccnd2P30280 289 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Pex1Q5BL07 1284 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Dmc1Q61880 340 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Ptpn14Q62130 1189 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Naa35Q6PHQ8 725 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Ppp1r9bQ6R891 817 aaKnown RBP16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Ccser1Q8C0C4 895 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Castor2Q8CAB8 329 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Trhr2Q9ERT2 382 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 CenpkQ9ESN5 271 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Pkd2l2Q9JLG4 621 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Sf3b1Q99NB9 1304 aaKnown RBP16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Cntnap4Q99P47 1310 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Plin4O88492 1403 aa16.84■□□□□ 0.29
Hmgb1-208ENSMUST00000139443 Zfp984A2A7A2 547 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 1700064H15RikD3Z4D4 81 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Rsph10bE9PYQ0 876 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Nolc1E9Q5C9 702 aaKnown RBP16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Epb41l2O70318 988 aaKnown RBP16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 TnfP06804 235 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Kif3aP28741 701 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Tbx3P70324 741 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Serpina1eQ00898 413 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Tekt4Q149S1 447 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 March5Q3KNM2 278 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 CrebrfQ8CDG5 640 aaKnown RBP16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 LgsnQ8CIX8 563 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Rpap2Q8VC34 614 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Sdcbp2Q99JZ0 292 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Gins2Q9D600 185 aa16.83■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Pramel3A2AHA7 463 aa16.82■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms