RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm1661E9Q963 441 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Slc27a3O88561 667 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Casp14O89094 257 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tph1P17532 447 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Marcksl1P28667 200 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ctc1Q5SUQ9 1212 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Vav2Q60992 868 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Klhl29Q80T74 875 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ints8Q80V86 995 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Pwp2Q8BU03 919 aaKnown RBP12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ccdc137Q8R0K4 290 aaKnown RBP12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Asb11Q9CQ31 323 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Golga1Q9CW79 758 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tdrd12Q9CWU0 1215 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 IkbipQ9DBZ1 373 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 IdeQ9JHR7 1019 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Phf2Q9WTU0 1096 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 RptorQ8K4Q0 1335 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Pex5O09012 639 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Casp4P70343 373 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rnf113a2Q14B01 337 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Palb2Q3U0P1 1104 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 R3hdm4Q4VBF2 262 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Zcchc2Q69ZB8 1166 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Swap70Q6A028 585 aaKnown RBP12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Zswim5Q80TC6 1188 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 SnphQ80U23 495 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tarsl2Q8BLY2 790 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Inpp5fQ8CDA1 1132 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cwf19l1Q8CI33 537 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Btbd6Q8K2J9 488 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 HibchQ8QZS1 385 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Med24Q99K74 987 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Noc2lQ9WV70 747 aaKnown RBP12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Scn9aQ62205 1984 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Kcnk16G5E845 292 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Serpinb8O08800 374 aaKnown RBP12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 GcP21614 476 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 LipeP54310 759 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 LxnP70202 222 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Adcy8P97490 1249 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 NfibP97863 570 aaKnown RBP12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cyp11b1Q3TG86 501 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ctnna2Q61301 953 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Q6DFW0 481 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Fsd1lQ8BYN5 507 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Lmo3Q8BZL8 145 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 AgpsQ8C0I1 645 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Nemp2Q8CB65 421 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ero1aQ8R180 464 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Lpgat1Q91YX5 370 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Fgfr1op2Q9CRA9 253 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Pdcd7Q9WTY1 482 aa12.38□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Prl6a1O35257 230 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Klrk1O54709 232 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cyp11b2P15539 500 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rab21P35282 222 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Mybl1P51960 751 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Stmn4P63042 189 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Aars2Q14CH7 980 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cpa1Q7TPZ8 419 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ece2Q80Z60 881 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Atg4cQ811C2 458 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Col23a1Q8K4G2 532 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Thumpd2Q9CZB3 528 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 PdiltQ9DAN1 588 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Styxl1Q9DAR2 321 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tlr5Q9JLF7 859 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Slc6a16A0A1L1SR47 742 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Fyb2A2A995 729 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Oip5A2AQ14 241 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Mdm4O35618 489 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Slc8a1P70414 970 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Bpifb5Q3UQ05 490 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gucy2fQ5SDA5 1108 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ppp2r5aQ6PD03 486 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 E2f7Q6S7F2 904 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Zfp449Q8CB76 518 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Sec14l2Q99J08 403 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Usp29Q9ES63 869 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cyth1Q9QX11 398 aa12.37□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cntnap2Q9CPW0 1332 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Apol8A2VDH7 339 aaKnown RBP12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gm3182K7N6T8 263 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 MyocO70624 490 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 GzmgP13366 248 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Prom2Q3UUY6 835 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 ChukQ60680 745 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Trim21Q62191 470 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Inpp4bQ6P1Y8 924 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 B4galnt4Q766D5 1034 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Fbxo38Q8BMI0 1194 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Hspbp1Q99P31 357 aaKnown RBP12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cnot8Q9D8X5 292 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Pard6bQ9JK83 371 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Apol7bB1AQP7 369 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Olfr247E9PVJ7 320 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Olfr819K7N727 320 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rad51bO35719 350 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Bmp2P21274 394 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms