RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Asap1Q9QWY8 1147 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 InsrrQ9WTL4 1300 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 N4bp2F8VQG7 1678 aaKnown RBP10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Lrp6O88572 1613 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Plekhg4A0A1L1SU27 1217 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Sh2d4bA6X942 431 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Apol6B7ZC55 329 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gucy1a2F8VQK3 730 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 ZfrO88532 1074 aaKnown RBP10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Mucl2P02815 138 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Hsd11b2P51661 386 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nudt1P53368 156 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cdh5P55284 784 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fam89aQ14BJ1 175 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Trip13Q3UA06 432 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Slc10a4Q3UEZ8 437 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Prdm1Q60636 856 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Slc27a1Q60714 646 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Aldh1a2Q62148 518 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rnaseh2bQ80ZV0 308 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Psmd5Q8BJY1 504 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gga3Q8BMI3 718 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Arhgap28Q8BN58 729 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rcor2Q8C796 523 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nup85Q8R480 656 aaKnown RBP10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Mrps22Q9CXW2 359 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nrip2Q9JHR9 270 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cabp5Q9JLK3 173 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Krt16Q9Z2K1 469 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pramef17A2ASJ1 475 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Otud7bB2RUR8 840 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ccdc78D3Z5T1 437 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gm5145F8VQ88 278 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 PpardP35396 440 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Plk2P53351 682 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tuba4aP68368 448 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 4930430A15RikQ05AC5 485 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Lmntd2Q0VET5 664 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 DSCC1Q14AI0 399 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Iqsec3Q3TES0 1195 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tatdn3Q3U1C6 294 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fam81aQ3UXZ6 364 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Marveld2Q3UZP0 555 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cdcp1Q5U462 833 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 NcaphQ8C156 731 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Vps52Q8C754 723 aaKnown RBP10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rtn1Q8K0T0 780 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 HnrnprQ8VHM5 632 aaKnown RBP10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Q91WD4 421 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ivns1abpQ920Q8 642 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Med15Q924H2 789 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 NonoQ99K48 473 aaKnown RBP10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Chst12Q99LL3 419 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rgs3Q9DC04 966 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rfx5Q9JL61 658 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Stk39Q9Z1W9 556 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Col1a2Q01149 1372 aa10.35□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Syngap1F6SEU4 1340 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Akap17bA2A3V1 959 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Zc3h7aE9PWW6 970 aaKnown RBP10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 1600015I10RikE9Q745 711 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Mllt10O54826 1068 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fam167bP17257 162 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Psmc2P46471 433 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ccser2Q3UHI0 833 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ampd1Q3V1D3 745 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Adora1Q60612 326 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Mcf2lQ64096 1149 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pcp4l1Q6W8Q3 68 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Olfr813Q7TRH5 310 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Serpina3fQ80X76 445 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cept1Q8BGS7 416 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ccdc122Q8BVN0 290 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ttc39cQ8VE09 580 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 VillQ91YD6 859 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Atp6v1b1Q91YH6 513 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Itgb3bpQ9CQ82 176 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Snx24Q9CRB0 169 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Lmbr1lQ9D1E5 489 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Kat2bQ9JHD1 813 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 PlekQ9JHK5 350 aaKnown RBP10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nup50Q9JIH2 466 aaKnown RBP10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Htra2Q9JIY5 458 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tmod2Q9JKK7 351 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Sorbs3Q9R1Z8 733 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Sh3tc1G3X9F6 1346 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gm21897J3KMP5 500 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gm21750L7N228 499 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 C1qbP14106 253 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Faf1P54731 649 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pex2P55098 305 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 AdkP55264 361 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 PhbP67778 272 aaKnown RBP10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Eya1P97767 591 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Map3k12Q60700 888 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Irf9Q61179 399 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Krt31Q61765 416 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Capn3Q64691 821 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Lrig3Q6P1C6 1117 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 CapslQ6P8Y1 208 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms