RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Gm4307E9PZY4 289 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zfp846G3X996 541 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Sult6b1P0CC03 303 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Xrcc6P23475 608 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cd40lgP27548 260 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Q32P12 615 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mief2Q5NCS9 454 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Bcap29Q61334 240 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Hspa1aQ61696 641 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Naif1Q6PFD7 327 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tmco5bQ80X59 307 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Atpaf1Q811I0 324 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 IarsQ8BU30 1262 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Galnt18Q8K1B9 622 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Srgap2Q91Z67 1071 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mri1Q9CQT1 369 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Q9CRW3 126 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Dkc1Q9ESX5 509 aaKnown RBP9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm6509A0A0J9YUV1 481 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Znf568E9PYI1 671 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm6502L7N456 481 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rundc3aO08576 446 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ess2O70279 479 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ripk2P58801 539 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Fam8a1Q3URQ4 399 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pyhin1Q8BV49 420 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Inpp5bQ8K337 993 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gmcl1Q920G9 524 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ska2Q9CR46 120 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Serpinb1aQ9D154 379 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Patl2A2ARM1 529 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Btbd35f22J3QN64 498 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 CtssO70370 340 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Snx12O70493 165 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Padi2Q08642 673 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Lag3Q61790 521 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Lcn3Q62471 182 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Q8BGK9 164 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Galnt5Q8C102 930 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 RhdQ8CF94 418 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Vps37bQ8R0J7 285 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gpn1Q8VCE2 372 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mark1Q8VHJ5 795 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Anks3Q9CZK6 655 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ccnb1ip1D3Z3K2 276 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Prkar1bP12849 381 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rab20P35295 233 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Trim72Q1XH17 477 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Fam193bQ3U2K0 892 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Adrbk2Q3UYH7 688 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ahcyl1Q80SW1 530 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pus3Q9JI38 481 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Bub1bQ9Z1S0 1052 aa9.5□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ankle1A8VU90 534 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm7233E9PZI8 198 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm9732F6QVC4 198 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm5798F7BTS7 198 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Atp8a2P98200 1148 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Malt1Q2TBA3 832 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Coq10bQ3THF9 240 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pin1rt1Q3ULQ2 159 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rasa3Q60790 834 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 OclnQ61146 521 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Scgb2b2Q6UGQ3 114 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Usp1Q8BJQ2 784 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Terb1Q8C0V1 768 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Idh3bQ91VA7 384 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Lzts2Q91YU6 671 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mogat1Q91ZV4 335 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 GhdcQ99J23 532 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cryl1Q99KP3 319 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 CrtapQ9CYD3 400 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Osbpl5Q9ER64 874 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 LatO54957 242 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rack1P68040 317 aaKnown RBP9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gjb6P70689 261 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zfp251Q6PCX8 632 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 L3mbtl3Q8BLB7 883 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Prpf18Q8BM39 342 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gtf3c4Q8BMQ2 817 aaKnown RBP9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Snrpb2Q9CQI7 225 aaKnown RBP9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Arfgap3Q9D8S3 523 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Acsl4Q9QUJ7 711 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gdf11Q9Z1W4 405 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Irs2P81122 1321 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Slc9a5B2RXE2 898 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Atp2a2O55143 1044 aaKnown RBP9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Usp46P62069 366 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rhpn1Q61085 643 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Atp1a3Q6PIC6 1013 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gpc3Q8CFZ4 579 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Lrrc40Q9CRC8 602 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Slc9a6A1L3P4 702 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mterf1bB9EJ57 379 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zfp597E9Q6S0 419 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Apol10bG3X9K7 334 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pcp4P63054 62 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Syce2Q505B8 171 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Fnip2Q80TD3 1108 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Sdhaf2Q8C6I2 164 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms