RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Il17cQ8K4C5 194 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Slc5a5Q99PN0 618 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 StambpQ9CQ26 424 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gm5737A0A140LI11 423 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Flot1O08917 428 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 YwhagP61982 247 aaKnown RBP12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ckap2lQ7TS74 745 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rusc1Q8BG26 893 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ccdc134Q8C7V8 229 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Bst2Q8R2Q8 172 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Dqx1Q924H9 718 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rnf135Q9CWS1 417 aa12.06□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tnfrsf11aO35305 625 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Syt2P46097 422 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Crnkl1P63154 690 aaKnown RBP12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Spata18Q0P557 537 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cyp11b1Q3TG86 501 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gm14685Q52KH6 695 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pja2Q80U04 707 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ttc7aQ8BGB2 858 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Thap12Q9CUX1 758 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Smok2bQ9QYZ3 484 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Smok2aQ9QYZ6 504 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Myh7Q91Z83 1935 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tada2bD3Z4Z0 420 aaKnown RBP12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cyth3O08967 399 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pdk4O70571 412 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 FechP22315 420 aaKnown RBP12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cdc25aP48964 514 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 RalaP63321 206 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pcdhb3Q91XZ7 784 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gbp7Q91Z40 638 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 4933428M09RikQ9D3X3 192 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 N4bp2F8VQG7 1678 aaKnown RBP12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Kcnh4A2A5F7 1018 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Zfp266E9Q2S7 604 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 CaluO35887 315 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Etv6P97360 485 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Dzip1lQ499E4 774 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Arhgef18Q6P9R4 1021 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ano5Q75UR0 904 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gps1Q99LD4 471 aaKnown RBP12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tex9Q9D845 387 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gm379J3QQ19 296 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Fen1P39749 378 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Esyt2Q3TZZ7 845 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Msl1Q6PDM1 616 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Anapc5Q8BTZ4 740 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pih1h3bQ8C6P5 218 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Nemp2Q8CB65 421 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rnf103Q9R1W3 683 aa12.05□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rfx8D3YU81 596 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rgsl1H3BL40 1073 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Myl1P05977 188 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Zscan2Q07230 614 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sult1d1Q3UZZ6 295 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 P2ry10Q8BFU7 328 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Trim35Q8C006 501 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tdrd12Q9CWU0 1215 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Klrc2Q9WTJ9 238 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Lama4P97927 1816 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Wnk3Q80XP9 1757 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 6030498E09RikB1AX85 169 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cage1Q5IR70 849 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Dlg4Q62108 724 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Adamts2Q8C9W3 1213 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Snf8Q9CZ28 258 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tmco5aQ9D9D5 303 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 C130060K24RikG3UWA8 416 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 CpQ61147 1061 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ankrd13dQ6PD24 605 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tas2r109Q7M707 316 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Usp37Q8C0R0 979 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Q8C6G1 249 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 DolkQ8R2Y3 534 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cd300ldQ8VCH2 221 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 St5Q924W7 1134 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ophn1Q99J31 802 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Thumpd2Q9CZB3 528 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 AllcQ9JHX6 414 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Slfn1Q9Z0I7 337 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Flt1P35969 1333 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ifnb1P01575 182 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ifnl2Q4VK74 193 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Wdr91Q7TMQ7 748 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tmc8Q7TN58 722 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ephb1Q8CBF3 984 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sugp1Q8CH02 643 aaKnown RBP12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tgif2lx2Q8K5B9 231 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Eya4Q9Z191 616 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Myh8P13542 1937 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Zfyve9A2A8R0 1397 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 KitP05532 979 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rasgrf1P27671 1262 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Fbxo41Q6NS60 873 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 C2cd5Q7TPS5 1016 aaKnown RBP12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 AmphQ7TQF7 686 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Slc51aQ8R000 340 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 AdigQ8R400 80 aa12.04□□□□□ -0.48
Topbp1-201ENSMUST00000035164 NalcnQ8BXR5 1738 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms