RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Rnpc3Q3UZ01 514 aaKnown RBP10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 FcgrtQ61559 365 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Stambpl1Q76N33 436 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm5622Q810Q0 167 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Trpa1Q8BLA8 1125 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Clec4gQ8BNX1 294 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ccdc65Q8VHI7 493 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Pgm1Q9D0F9 562 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Pabpc6Q9D4E6 643 aaKnown RBP10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Itpripl1A2ASA8 547 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Slc35g2D3YVE8 412 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm10436L7N1Y3 520 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Pfdn6Q03958 127 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Zfp956Q3UZY6 572 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Atl2Q6PA06 583 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mageb18Q8BQR7 327 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Irx5Q9JKQ4 484 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Rabgef1Q9JM13 491 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Krt17Q9QWL7 433 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 SufuQ9Z0P7 484 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Wnk3Q80XP9 1757 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 XdhQ00519 1335 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ccnyl1D3YUJ3 367 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gucy1a2F8VQK3 730 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Usp4P35123 962 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Hnrnph2P70333 449 aaKnown RBP10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Lmntd2Q0VET5 664 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Usp13Q5BKP2 858 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Fam183bQ5NC57 135 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Atp6v0d2Q80SY3 350 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 SucoQ8C341 1250 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Plcb4Q91UZ1 1175 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gmcl1Q920G9 524 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Rpa3Q9CQ71 121 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Pidd1Q9ERV7 915 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Hyou1Q9JKR6 999 aaKnown RBP10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Akt3Q9WUA6 479 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Eya4Q9Z191 616 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Sucla2Q9Z2I9 463 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tet3Q8BG87 1668 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Nme9A0A1L1SUL6 329 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Arl4aP61213 200 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Lgr6Q3UVD5 967 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ttf2Q5NC05 1138 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Kif11Q6P9P6 1052 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gjd4Q8BSD4 364 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mterf4Q8BVN4 346 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Rfx6Q8C7R7 927 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Znf467Q8JZL0 594 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 MlphQ91V27 590 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ccdc70Q9D9B0 223 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Caln1Q9JJG7 219 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Robo1O89026 1612 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Cul4bA2A432 970 aaKnown RBP10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm10250G3X9L6 160 aaKnown RBP10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tac1P41539 130 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tubgcp3P58854 905 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gprin1Q3UNH4 932 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Avpr1aQ62463 423 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Usp8Q80U87 1080 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Slitrk3Q810B9 980 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 TbckQ8BM85 762 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Slc4a7Q8BTY2 1034 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Anapc5Q8BTZ4 740 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Taco1Q8K0Z7 294 aaKnown RBP10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Scrn2Q8VCA8 425 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Atp5hQ9DCX2 161 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Arhgap4B1AUY3 965 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ttc17E9PVB5 1198 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gimd1E9PW74 217 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ifnb1P01575 182 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mucl2P02815 138 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Wnt10bP48614 389 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Stmn1P54227 149 aaKnown RBP10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Rnf180Q3U827 592 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 PighQ5M9N4 188 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Epha7Q61772 998 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ccdc40Q8BI79 1192 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tk2Q9R088 270 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Extl3Q9WVL6 918 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Psmd10Q9Z2X2 231 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Trim43cP86449 446 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mars2Q499X9 586 aaKnown RBP10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Fbxo44Q8BK26 255 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Fam20aQ8CID3 541 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Pex19Q8VCI5 299 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Grin3bQ91ZU9 1003 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Afg3l1Q920A7 789 aaKnown RBP10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Morf4l2Q9R0Q4 288 aa10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Fxr2Q9WVR4 673 aaKnown RBP10.53□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Zmym2Q9CU65 1376 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Psmc5P62196 406 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Acot6Q32Q92 419 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Lrch2Q3UMG5 773 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Skap2Q3UND0 358 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Zfp953Q3UPV7 304 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Vmn1r191Q8K4D0 298 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 CbsQ91WT9 561 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Pip4k2cQ91XU3 421 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Add1Q9QYC0 735 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms