RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Kcnu1O54982 1121 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ptk2P34152 1090 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 BC051142Q3V0M8 400 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Igsf3Q6ZQA6 1194 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cct8l1Q80YT3 562 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tmem117Q8BH18 514 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cfap36Q8C6E0 343 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Kat14Q8CID0 779 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Olfr395Q8VGR3 312 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tom1l1Q923U0 474 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Capn9Q9D805 690 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Sh2b2Q9JID9 621 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Psmg1Q9JK23 289 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Txnrd2Q9JLT4 524 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Zscan4-ps3A0A1B0GRH6 506 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Zscan4-ps2A0A1C7CYU6 506 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cyp2c69E9PXC3 491 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 CraddO88843 199 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 ProcP33587 460 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Hspa9P38647 679 aaKnown RBP9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 PklrP53657 574 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cyp2c40P56657 491 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mex3cQ05A36 652 aaKnown RBP9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Neurl1bQ0MW30 546 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rgs9bpQ148R9 237 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tmprss11aQ3UQ41 389 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rhox12Q4TU81 186 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Vil1Q62468 827 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 A430089I19RikQ8C9W1 407 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Syf2Q9D198 242 aaKnown RBP9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Stk4Q9JI11 487 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Kif13bA0A286YCV9 1847 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mgat1P27808 447 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rab20P35295 233 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 GssP51855 474 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Oca2Q62052 833 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Zc3h6Q8BYK8 1177 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Stxbp5Q8K400 1152 aaKnown RBP9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Q922C1 641 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Psma8Q9CWH6 250 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Fam111aQ9D2L9 613 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 ParvaQ9EPC1 372 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm28036V9GXJ1 658 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Zfp94E9Q6Y4 486 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm3182K7N6T8 263 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Fam207aP58468 219 aaKnown RBP9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tex11Q14AT2 947 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Slc30a9Q5IRJ6 567 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Scarf1Q5ND28 820 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Zcchc2Q69ZB8 1166 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ppp2r2aQ6P1F6 447 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tdpoz2Q717B2 364 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tmem132cQ8CEF9 1099 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Sec63Q8VHE0 760 aaKnown RBP9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 1700109H08RikQ9D9C0 210 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Slc15a2Q9ES07 729 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Krt17Q9QWL7 433 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Diaph3Q9Z207 1171 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 AfmO89020 608 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Lrch2Q3UMG5 773 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ppp4r3cQ3V0Y1 813 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Sco1Q5SUC9 284 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 HarsQ61035 509 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 RetsatQ64FW2 609 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tas2r134Q7TQB0 298 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mageb18Q8BQR7 327 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 YarsQ91WQ3 528 aaKnown RBP9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Nek8Q91ZR4 698 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mettl16Q9CQG2 553 aaKnown RBP9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Riok3Q9DBU3 519 aaKnown RBP9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mast2Q60592 1734 aa9.05□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 JrklB2RRL2 523 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ccdc152E9PX14 254 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Olfr67F8VPJ8 320 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 EpoP07321 192 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 PtpraP18052 829 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Hoxc13P50207 328 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Irx2P81066 474 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ly9Q01965 654 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Wdr41Q3UDP0 460 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 ErfeQ6PGN1 340 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 HlcsQ920N2 722 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Atad3Q925I1 591 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mxra8Q9DBV4 442 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Arfgef1G3X9K3 1846 aaKnown RBP9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 NfiaQ02780 532 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Abi3bpQ59IW6 1179 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Pick1Q62083 416 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Frmd5Q6P5H6 517 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Pcdhb2Q91Y00 799 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mettl13Q91YR5 698 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ranbp17Q99NF8 1088 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ankrd2Q9WV06 328 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ppp2r3dQ9Z176 491 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Eif2ak3Q9Z2B5 1114 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Serpinb6dQ3UWK8 375 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Dusp4Q8BFV3 398 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 NptxrQ99J85 493 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 IqcdQ9D3V1 458 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm9774A0A0A6YVU8 407 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms