RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W PRR2Q12310 699 aa3.4□□□□□ -1.87
SWI1YPL016W CDC39P25655 2108 aaKnown RBP3.4□□□□□ -1.87
SWI1YPL016W CDC7P06243 507 aa3.39□□□□□ -1.87
SWI1YPL016W ADK1P07170 222 aaKnown RBP3.39□□□□□ -1.87
SWI1YPL016W SEC59P20048 519 aa3.39□□□□□ -1.87
SWI1YPL016W IDH1P28834 360 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SWI1YPL016W UGX2P32772 223 aa3.39□□□□□ -1.87
SWI1YPL016W APL3P38065 1025 aa3.39□□□□□ -1.87
SWI1YPL016W SLZ1P40167 298 aa3.39□□□□□ -1.87
SWI1YPL016W LOH1P47055 219 aa3.39□□□□□ -1.87
SWI1YPL016W TIS11P47977 285 aa3.39□□□□□ -1.87
SWI1YPL016W NPY1P53164 384 aa3.39□□□□□ -1.87
SWI1YPL016W AAD4Q07747 329 aa3.39□□□□□ -1.87
SWI1YPL016W DCI1Q08558 271 aa3.39□□□□□ -1.87
SWI1YPL016W AHA1Q12449 350 aaKnown RBP3.39□□□□□ -1.87
SWI1YPL016W HSH49Q99181 213 aaPredicted RBP3.39□□□□□ -1.87
SWI1YPL016W RGS2Q99188 309 aa3.39□□□□□ -1.87
SWI1YPL016W CAN1P04817 590 aa3.39□□□□□ -1.87
SWI1YPL016W GCY1P14065 312 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SWI1YPL016W CUP2P15315 225 aa3.39□□□□□ -1.87
SWI1YPL016W AAR2P32357 355 aaPredicted RBP3.39□□□□□ -1.87
SWI1YPL016W YHR035WP38769 630 aa3.39□□□□□ -1.87
SWI1YPL016W ERJ5P43613 295 aaPredicted RBP3.39□□□□□ -1.87
SWI1YPL016W YAE1P47118 141 aaPredicted RBP3.39□□□□□ -1.87
SWI1YPL016W YJR120WP47157 116 aa3.39□□□□□ -1.87
SWI1YPL016W EXG2P52911 562 aa3.39□□□□□ -1.87
SWI1YPL016W SDT1P53078 280 aa3.39□□□□□ -1.87
SWI1YPL016W BUD25P85052 153 aa3.39□□□□□ -1.87
SWI1YPL016W MRPS17Q03246 237 aaPredicted RBP3.39□□□□□ -1.87
SWI1YPL016W PRM6Q04705 352 aa3.39□□□□□ -1.87
SWI1YPL016W BUD20Q08004 166 aaPredicted RBP3.39□□□□□ -1.87
SWI1YPL016W KCS1Q12494 1050 aa3.39□□□□□ -1.87
SWI1YPL016W ADE4P04046 510 aaKnown RBP3.39□□□□□ -1.87
SWI1YPL016W CDC33P07260 213 aaKnown RBP3.39□□□□□ -1.87
SWI1YPL016W SRB5P32585 307 aa3.39□□□□□ -1.87
SWI1YPL016W THI80P35202 319 aa3.39□□□□□ -1.87
SWI1YPL016W GIM4P40005 111 aaKnown RBP3.39□□□□□ -1.87
SWI1YPL016W UFE1P41834 346 aa3.39□□□□□ -1.87
SWI1YPL016W TIM21P53220 239 aa3.39□□□□□ -1.87
SWI1YPL016W DUS1P53759 423 aaKnown RBP3.39□□□□□ -1.87
SWI1YPL016W FRK1Q03002 865 aaPredicted RBP3.39□□□□□ -1.87
SWI1YPL016W ISU2Q12056 156 aa3.39□□□□□ -1.87
SWI1YPL016W YDR262WQ12331 272 aa3.39□□□□□ -1.87
SWI1YPL016W YOL159C-AQ3E769 90 aa3.39□□□□□ -1.87
SWI1YPL016W YBL112CQ3E7Y4 105 aa3.39□□□□□ -1.87
SWI1YPL016W YEL009C-AA0A023PZF2 135 aa3.38□□□□□ -1.87
SWI1YPL016W CYC7P00045 113 aa3.38□□□□□ -1.87
SWI1YPL016W GCD1P09032 578 aaPredicted RBP3.38□□□□□ -1.87
SWI1YPL016W RPL4AP10664 362 aaKnown RBP3.38□□□□□ -1.87
SWI1YPL016W MNE1P24720 663 aa3.38□□□□□ -1.87
SWI1YPL016W TIP1P27654 210 aaPredicted RBP3.38□□□□□ -1.87
SWI1YPL016W ERG1P32476 496 aaKnown RBP3.38□□□□□ -1.87
SWI1YPL016W MRPL15P36523 253 aa3.38□□□□□ -1.87
SWI1YPL016W OSW5P40219 148 aa3.38□□□□□ -1.87
SWI1YPL016W RPL4BP49626 362 aaKnown RBP3.38□□□□□ -1.87
SWI1YPL016W TOS2P50078 622 aa3.38□□□□□ -1.87
SWI1YPL016W AAT1Q01802 451 aa3.38□□□□□ -1.87
SWI1YPL016W TMN2Q04562 672 aa3.38□□□□□ -1.87
SWI1YPL016W CDC123Q05791 360 aa3.38□□□□□ -1.87
SWI1YPL016W AIM6Q07716 390 aa3.38□□□□□ -1.87
SWI1YPL016W TMA17Q12513 150 aa3.38□□□□□ -1.87
SWI1YPL016W YOS1Q3E834 85 aa3.38□□□□□ -1.87
SWI1YPL016W YOR019WQ99248 730 aa3.38□□□□□ -1.87
SWI1YPL016W PUT1P09368 476 aa3.38□□□□□ -1.87
SWI1YPL016W SAM35P14693 329 aa3.38□□□□□ -1.87
SWI1YPL016W SUA7P29055 345 aaPredicted RBP3.38□□□□□ -1.87
SWI1YPL016W NTC20P38302 140 aaPredicted RBP3.38□□□□□ -1.87
SWI1YPL016W YIL161WP40449 235 aaKnown RBP3.38□□□□□ -1.87
SWI1YPL016W SLD5Q03406 294 aa3.38□□□□□ -1.87
SWI1YPL016W CUE4Q04201 117 aaPredicted RBP3.38□□□□□ -1.87
SWI1YPL016W PEX12Q04370 399 aa3.38□□□□□ -1.87
SWI1YPL016W ZEO1Q08245 113 aa3.38□□□□□ -1.87
SWI1YPL016W PIN2Q12057 282 aa3.38□□□□□ -1.87
SWI1YPL016W POC4Q12245 148 aaPredicted RBP3.38□□□□□ -1.87
SWI1YPL016W TDH3P00359 332 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SWI1YPL016W SRM1P21827 482 aa3.38□□□□□ -1.87
SWI1YPL016W PRO1P32264 428 aa3.38□□□□□ -1.87
SWI1YPL016W SLC1P33333 303 aa3.38□□□□□ -1.87
SWI1YPL016W RIB1P38066 345 aa3.38□□□□□ -1.87
SWI1YPL016W YHR177WP38867 453 aa3.38□□□□□ -1.87
SWI1YPL016W RMD8P43620 662 aa3.38□□□□□ -1.87
SWI1YPL016W PET130P47065 347 aa3.38□□□□□ -1.87
SWI1YPL016W VPS25P47142 202 aa3.38□□□□□ -1.87
SWI1YPL016W YJR107WP47145 328 aa3.38□□□□□ -1.87
SWI1YPL016W THI7Q05998 598 aa3.38□□□□□ -1.87
SWI1YPL016W LDS2Q08218 356 aa3.38□□□□□ -1.87
SWI1YPL016W MCA1Q08601 432 aa3.38□□□□□ -1.87
SWI1YPL016W PRE1P22141 198 aaKnown RBP3.38□□□□□ -1.87
SWI1YPL016W POT1P27796 417 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SWI1YPL016W LDB7P38210 180 aa3.38□□□□□ -1.87
SWI1YPL016W RMD6P39975 231 aa3.38□□□□□ -1.87
SWI1YPL016W BMT5P40493 336 aa3.38□□□□□ -1.87
SWI1YPL016W FIS1P40515 155 aa3.38□□□□□ -1.87
SWI1YPL016W ACS2P52910 683 aaKnown RBP3.38□□□□□ -1.87
SWI1YPL016W YGR126WP53274 230 aa3.38□□□□□ -1.87
SWI1YPL016W YMR252CQ04814 134 aa3.38□□□□□ -1.87
SWI1YPL016W YMR034CQ05131 434 aaPredicted RBP3.38□□□□□ -1.87
SWI1YPL016W ENV9Q08651 330 aa3.38□□□□□ -1.87
SWI1YPL016W NBP2Q12163 236 aa3.38□□□□□ -1.87
SWI1YPL016W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms